Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Gm7082-201ENSMUST00000209880 969 ntBASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 AC153929.1-201ENSMUST00000219009 303 ntBASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 AC164437.3-201ENSMUST00000228323 347 ntBASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Gm42748-201ENSMUST00000199354 2341 ntBASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 AC164702.1-201ENSMUST00000220135 2212 ntBASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Gm8899-201ENSMUST00000214635 1332 ntBASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Foxh1-201ENSMUST00000037824 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Col16a1Q8BLX7 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Gm11500-201ENSMUST00000118237 601 ntBASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Gm8197-202ENSMUST00000193422 934 ntBASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Gm45484-201ENSMUST00000210310 1141 ntBASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Gm18642-201ENSMUST00000206642 1400 ntBASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Gm43334-201ENSMUST00000197740 1318 ntBASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Gm11502-201ENSMUST00000120917 1211 ntBASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Kdm4dl-201ENSMUST00000184843 1187 ntBASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Gm37826-201ENSMUST00000195329 322 ntBASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Gm3433-201ENSMUST00000210149 1058 ntBASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 CT573047.1-201ENSMUST00000223652 851 ntBASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 CT010506.1-201ENSMUST00000223673 349 ntBASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Tsku-203ENSMUST00000165257 2514 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Oxsm-202ENSMUST00000112624 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Col16a1Q8BLX7 Gm38089-201ENSMUST00000193585 1514 ntBASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Gm13019-201ENSMUST00000120000 276 ntBASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Gm14395-201ENSMUST00000120494 563 ntBASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 1600010M07Rik-202ENSMUST00000188662 654 ntTSL 2 BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Gm42779-201ENSMUST00000198807 406 ntBASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Col16a1Q8BLX7 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms