Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Gm12363-201ENSMUST00000122250 668 ntBASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Gm24196-201ENSMUST00000179161 110 ntBASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Gm38092-201ENSMUST00000195600 653 ntBASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Gm9908-201ENSMUST00000211534 448 ntBASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 AC153961.1-201ENSMUST00000217760 385 ntBASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Gm24136-201ENSMUST00000083374 165 ntBASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Trim6Q8BGE7 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Gm38187-201ENSMUST00000195609 4709 ntBASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Auts2-212ENSMUST00000178555 309 ntBASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Gm37102-201ENSMUST00000195740 1105 ntBASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 AC122291.1-201ENSMUST00000228937 5748 ntBASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Trim6Q8BGE7 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 Gm13492-201ENSMUST00000119772 665 ntBASIC12.92□□□□□ -0.34
Trim6Q8BGE7 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 Gm22331-201ENSMUST00000158066 136 ntBASIC12.92□□□□□ -0.34
Trim6Q8BGE7 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 Gm4271-201ENSMUST00000174444 973 ntBASIC12.92□□□□□ -0.34
Trim6Q8BGE7 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 CT025535.1-201ENSMUST00000227172 491 ntBASIC12.92□□□□□ -0.34
Trim6Q8BGE7 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trim6Q8BGE7 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 73.5 ms