Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Trim50Q810I2 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Nsf-202ENSMUST00000103075 3766 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Trim50Q810I2 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Gm15547-201ENSMUST00000122152 333 ntBASIC11.86□□□□□ -0.51
Trim50Q810I2 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim50Q810I2 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Mir6420-201ENSMUST00000185032 102 ntBASIC11.86□□□□□ -0.51
Trim50Q810I2 Gm31256-201ENSMUST00000194705 506 ntBASIC11.86□□□□□ -0.51
Trim50Q810I2 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 AC154222.2-201ENSMUST00000225848 607 ntBASIC11.86□□□□□ -0.51
Trim50Q810I2 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Afg3l1-201ENSMUST00000001520 4227 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.86□□□□□ -0.51
Trim50Q810I2 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Gm18626-201ENSMUST00000221512 1409 ntBASIC11.86□□□□□ -0.51
Trim50Q810I2 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Trim50Q810I2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim50Q810I2 Erbin-201ENSMUST00000022222 6369 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim50Q810I2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim50Q810I2 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Igtp-202ENSMUST00000094169 1767 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim50Q810I2 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim50Q810I2 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.85□□□□□ -0.51
Trim50Q810I2 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Trim50Q810I2 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Gm14723-201ENSMUST00000118686 215 ntBASIC11.85□□□□□ -0.51
Trim50Q810I2 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC11.85□□□□□ -0.51
Trim50Q810I2 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Trim50Q810I2 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC11.85□□□□□ -0.51
Trim50Q810I2 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Gm7619-201ENSMUST00000210649 1282 ntBASIC11.85□□□□□ -0.51
Trim50Q810I2 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim50Q810I2 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim50Q810I2 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim50Q810I2 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim50Q810I2 Gm9996-201ENSMUST00000070359 913 ntBASIC11.85□□□□□ -0.51
Trim50Q810I2 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC11.85□□□□□ -0.51
Trim50Q810I2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC11.85□□□□□ -0.51
Trim50Q810I2 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Trim50Q810I2 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Trim50Q810I2 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.85□□□□□ -0.51
Trim50Q810I2 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms