Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Gm45495-201ENSMUST00000200940 1700 ntBASIC12.15□□□□□ -0.46
Rpp38Q80UU2 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Gm15276-201ENSMUST00000145953 498 ntBASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Gm17931-201ENSMUST00000208132 634 ntBASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 AC123665.1-201ENSMUST00000228204 438 ntBASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Rpp38Q80UU2 Gm43267-201ENSMUST00000199664 1796 ntBASIC12.15□□□□□ -0.46
Rpp38Q80UU2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC12.15□□□□□ -0.47
Rpp38Q80UU2 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Rpp38Q80UU2 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC12.15□□□□□ -0.47
Rpp38Q80UU2 Gm9796-201ENSMUST00000062249 2250 ntBASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 AC138329.2-201ENSMUST00000225579 1842 ntBASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Ccl4-201ENSMUST00000019074 660 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Gm44651-201ENSMUST00000207343 372 ntBASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Polm-202ENSMUST00000109837 2697 ntTSL 5 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 AC126257.1-201ENSMUST00000213195 1536 ntBASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Iqcc-201ENSMUST00000046675 2639 ntAPPRIS P2 TSL 2 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Rpp38Q80UU2 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Gm11511-201ENSMUST00000118146 540 ntBASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Gm13350-201ENSMUST00000120519 479 ntBASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Gm7584-201ENSMUST00000175829 940 ntBASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Gm27320-201ENSMUST00000184892 109 ntBASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Gm9136-201ENSMUST00000193368 454 ntBASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Gm4607-201ENSMUST00000206649 577 ntBASIC12.13□□□□□ -0.47
Rpp38Q80UU2 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.13□□□□□ -0.47
Rpp38Q80UU2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Gm5455-201ENSMUST00000058710 715 ntBASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Olfr582-201ENSMUST00000098212 960 ntBASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
Rpp38Q80UU2 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms