Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Gm11450-201ENSMUST00000121144 333 ntBASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Gm8956-201ENSMUST00000203939 825 ntBASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ubfd1Q78JW9 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Gm5780-201ENSMUST00000217774 1834 ntBASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Gm23596-201ENSMUST00000104304 132 ntBASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Chtf8-203ENSMUST00000176090 615 ntTSL 5 BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Gm42629-201ENSMUST00000199063 1102 ntBASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Gm21811-201ENSMUST00000096485 930 ntBASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Ubfd1Q78JW9 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Bean1-206ENSMUST00000213077 1373 ntAPPRIS ALT2 TSL 3 BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Gm12196-201ENSMUST00000120954 262 ntBASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Gm12164-201ENSMUST00000121695 551 ntBASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC11.85□□□□□ -0.51
Ubfd1Q78JW9 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms