Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Notch3Q61982 Rnf133-201ENSMUST00000063548 1308 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Notch3Q61982 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Notch3Q61982 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Notch3Q61982 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Notch3Q61982 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC9.39□□□□□ -0.91
Notch3Q61982 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Notch3Q61982 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Notch3Q61982 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Notch3Q61982 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Notch3Q61982 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC9.39□□□□□ -0.91
Notch3Q61982 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Notch3Q61982 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC9.38□□□□□ -0.91
Notch3Q61982 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Gm44891-201ENSMUST00000208817 2223 ntBASIC9.38□□□□□ -0.91
Notch3Q61982 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC9.38□□□□□ -0.91
Notch3Q61982 Gm16296-201ENSMUST00000159905 325 ntBASIC9.38□□□□□ -0.91
Notch3Q61982 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC9.38□□□□□ -0.91
Notch3Q61982 Gm6652-201ENSMUST00000186414 1070 ntBASIC9.38□□□□□ -0.91
Notch3Q61982 Gm3028-201ENSMUST00000213805 1119 ntBASIC9.38□□□□□ -0.91
Notch3Q61982 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC9.38□□□□□ -0.91
Notch3Q61982 AC166344.1-202ENSMUST00000224139 234 ntBASIC9.38□□□□□ -0.91
Notch3Q61982 Gzmn-202ENSMUST00000225535 989 ntBASIC9.38□□□□□ -0.91
Notch3Q61982 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC9.38□□□□□ -0.91
Notch3Q61982 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC9.38□□□□□ -0.91
Notch3Q61982 Rnf144a-202ENSMUST00000062149 4812 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Ebf3-202ENSMUST00000106118 3736 ntAPPRIS ALT1 TSL 5 BASIC9.38□□□□□ -0.91
Notch3Q61982 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Notch3Q61982 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.38□□□□□ -0.91
Notch3Q61982 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC9.38□□□□□ -0.91
Notch3Q61982 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
Notch3Q61982 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Tmem184a-202ENSMUST00000110832 4326 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC9.38□□□□□ -0.91
Notch3Q61982 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC9.38□□□□□ -0.91
Notch3Q61982 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC9.38□□□□□ -0.91
Notch3Q61982 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC9.38□□□□□ -0.91
Notch3Q61982 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC9.38□□□□□ -0.91
Notch3Q61982 Gm15515-201ENSMUST00000117827 822 ntBASIC9.38□□□□□ -0.91
Notch3Q61982 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC9.38□□□□□ -0.91
Notch3Q61982 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Gm7600-201ENSMUST00000209657 785 ntBASIC9.38□□□□□ -0.91
Notch3Q61982 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC9.38□□□□□ -0.91
Notch3Q61982 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Sidt2-202ENSMUST00000114573 4012 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC9.38□□□□□ -0.91
Notch3Q61982 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC9.37□□□□□ -0.91
Notch3Q61982 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC9.37□□□□□ -0.91
Notch3Q61982 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC9.37□□□□□ -0.91
Notch3Q61982 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Notch3Q61982 Gm13045-201ENSMUST00000119019 712 ntBASIC9.37□□□□□ -0.91
Notch3Q61982 Gm6506-201ENSMUST00000119775 1136 ntBASIC9.37□□□□□ -0.91
Notch3Q61982 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.37□□□□□ -0.91
Notch3Q61982 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.37□□□□□ -0.91
Notch3Q61982 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 CT025551.1-201ENSMUST00000223996 692 ntBASIC9.37□□□□□ -0.91
Notch3Q61982 AC154222.2-201ENSMUST00000225848 607 ntBASIC9.37□□□□□ -0.91
Notch3Q61982 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Notch3Q61982 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC9.37□□□□□ -0.91
Notch3Q61982 Atp9b-201ENSMUST00000091790 5357 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Notch3Q61982 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC9.37□□□□□ -0.91
Notch3Q61982 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC9.37□□□□□ -0.91
Notch3Q61982 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.91
Notch3Q61982 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC9.37□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms