Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Gm20772-201ENSMUST00000188928 1343 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm21310-202ENSMUST00000189630 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm20795-202ENSMUST00000190909 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm21454-202ENSMUST00000192204 1343 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm21440-201ENSMUST00000192749 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm20831-202ENSMUST00000194411 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm20807-201ENSMUST00000194687 1336 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm21425-202ENSMUST00000195626 1345 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Col12a1Q60847 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 AC022682.1-201ENSMUST00000224624 2023 ntBASIC11.69□□□□□ -0.54
Col12a1Q60847 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 AC154354.1-203ENSMUST00000225565 1364 ntBASIC11.69□□□□□ -0.54
Col12a1Q60847 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC11.69□□□□□ -0.54
Col12a1Q60847 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm8968-201ENSMUST00000199133 1303 ntBASIC11.69□□□□□ -0.54
Col12a1Q60847 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Col12a1Q60847 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Col12a1Q60847 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm18642-201ENSMUST00000206642 1400 ntBASIC11.69□□□□□ -0.54
Col12a1Q60847 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Col12a1Q60847 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm20493-201ENSMUST00000173706 213 ntBASIC11.69□□□□□ -0.54
Col12a1Q60847 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.69□□□□□ -0.54
Col12a1Q60847 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Col12a1Q60847 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col12a1Q60847 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col12a1Q60847 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col12a1Q60847 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC11.68□□□□□ -0.54
Col12a1Q60847 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col12a1Q60847 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col12a1Q60847 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col12a1Q60847 Fas-202ENSMUST00000112472 555 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col12a1Q60847 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.68□□□□□ -0.54
Col12a1Q60847 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC11.68□□□□□ -0.54
Col12a1Q60847 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC11.68□□□□□ -0.54
Col12a1Q60847 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC11.68□□□□□ -0.54
Col12a1Q60847 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.68□□□□□ -0.54
Col12a1Q60847 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
Col12a1Q60847 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col12a1Q60847 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.68□□□□□ -0.54
Col12a1Q60847 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col12a1Q60847 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col12a1Q60847 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col12a1Q60847 Gm9924-202ENSMUST00000192760 2311 ntBASIC11.68□□□□□ -0.54
Col12a1Q60847 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col12a1Q60847 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Col12a1Q60847 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col12a1Q60847 Gm6755-201ENSMUST00000100598 864 ntBASIC11.68□□□□□ -0.54
Col12a1Q60847 Gm6740-201ENSMUST00000100617 864 ntBASIC11.68□□□□□ -0.54
Col12a1Q60847 Gm12345-201ENSMUST00000119288 898 ntBASIC11.68□□□□□ -0.54
Col12a1Q60847 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Col12a1Q60847 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Col12a1Q60847 Mir7035-201ENSMUST00000184713 82 ntBASIC11.68□□□□□ -0.54
Col12a1Q60847 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
Col12a1Q60847 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC11.68□□□□□ -0.54
Col12a1Q60847 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col12a1Q60847 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col12a1Q60847 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Col12a1Q60847 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.68□□□□□ -0.54
Col12a1Q60847 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Gm45605-201ENSMUST00000210265 4269 ntBASIC11.67□□□□□ -0.54
Col12a1Q60847 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC11.67□□□□□ -0.54
Col12a1Q60847 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Col12a1Q60847 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC11.67□□□□□ -0.54
Col12a1Q60847 Gm43726-201ENSMUST00000199110 775 ntBASIC11.67□□□□□ -0.54
Col12a1Q60847 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Gstm2-202ENSMUST00000066530 854 ntTSL 3 BASIC11.67□□□□□ -0.54
Col12a1Q60847 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Col12a1Q60847 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms