Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Spcs1-203ENSMUST00000226374 592 ntBASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Shroom1Q5SX79 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shroom1Q5SX79 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shroom1Q5SX79 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Shroom1Q5SX79 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.96□□□□□ -0.34
Shroom1Q5SX79 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.34
Shroom1Q5SX79 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shroom1Q5SX79 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Shroom1Q5SX79 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shroom1Q5SX79 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shroom1Q5SX79 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shroom1Q5SX79 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shroom1Q5SX79 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Shroom1Q5SX79 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.96□□□□□ -0.34
Shroom1Q5SX79 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Shroom1Q5SX79 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Shroom1Q5SX79 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Gm22133-201ENSMUST00000102082 109 ntBASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Gm9062-201ENSMUST00000117712 727 ntBASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Hcfc1r1-203ENSMUST00000180140 693 ntAPPRIS P2 TSL 2 BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Gm44100-201ENSMUST00000204329 436 ntBASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Gm18393-201ENSMUST00000208349 1131 ntBASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Gm7207-201ENSMUST00000211575 1067 ntBASIC12.95□□□□□ -0.34
Shroom1Q5SX79 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Gm26035-201ENSMUST00000083065 308 ntBASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Shroom1Q5SX79 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Gm45342-201ENSMUST00000210903 1363 ntBASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Gm11450-201ENSMUST00000121144 333 ntBASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Shroom1Q5SX79 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.93□□□□□ -0.34
Shroom1Q5SX79 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Shroom1Q5SX79 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.93□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms