Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Gm45161-201ENSMUST00000207316 2263 ntBASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav3-3Q5R1C3 Ocstamp-201ENSMUST00000029213 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Dcun1d2-203ENSMUST00000110839 2937 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Qars-203ENSMUST00000134939 2374 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Cd93-201ENSMUST00000099269 6677 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Gm43703-201ENSMUST00000200523 763 ntBASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Gm17795-201ENSMUST00000214505 757 ntBASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Gm5161-201ENSMUST00000075243 853 ntBASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 AC127597.1-201ENSMUST00000225697 5711 ntBASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Nol3-201ENSMUST00000014920 3176 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Ap3b2-205ENSMUST00000152355 3168 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Tulp2-210ENSMUST00000210868 1664 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC9.13□□□□□ -0.95
Trav3-3Q5R1C3 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Nfyc-204ENSMUST00000120779 2006 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Mfap3l-204ENSMUST00000161702 2215 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Tbpl1-202ENSMUST00000127698 2873 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 AC159621.2-201ENSMUST00000223519 1326 ntBASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Tubb2b-201ENSMUST00000075774 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Gm4204-201ENSMUST00000110798 1231 ntBASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Gm14730-201ENSMUST00000122378 1045 ntBASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Trav3-3Q5R1C3 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC9.12□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms