Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Gm9387-201ENSMUST00000098624 1320 ntBASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim41Q5NCC3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Add2-208ENSMUST00000203786 2289 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Gm9072-201ENSMUST00000218390 1514 ntBASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Klk6-201ENSMUST00000107966 1095 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Gm8100-201ENSMUST00000182906 988 ntBASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Mir6973a-201ENSMUST00000183646 78 ntBASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Gm27530-201ENSMUST00000184096 98 ntBASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Gm27910-201ENSMUST00000185004 107 ntBASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Gm18059-201ENSMUST00000208073 580 ntBASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Trim41Q5NCC3 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Gm9361-201ENSMUST00000198695 1507 ntBASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Aurkc-203ENSMUST00000207711 1320 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Gm14247-201ENSMUST00000120950 237 ntBASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Gm28388-201ENSMUST00000186262 437 ntBASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Gm2965-201ENSMUST00000198365 343 ntBASIC21.15■□□□□ 0.98
Trim41Q5NCC3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Trim41Q5NCC3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trim41Q5NCC3 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trim41Q5NCC3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim41Q5NCC3 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim41Q5NCC3 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim41Q5NCC3 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Trim41Q5NCC3 E330011O21Rik-202ENSMUST00000209498 1403 ntTSL 5 BASIC21.14■□□□□ 0.98
Trim41Q5NCC3 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim41Q5NCC3 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.98
Trim41Q5NCC3 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Trim41Q5NCC3 Gm6170-201ENSMUST00000187672 1388 ntBASIC21.14■□□□□ 0.98
Trim41Q5NCC3 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Trim41Q5NCC3 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Trim41Q5NCC3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Trim41Q5NCC3 Gm24891-201ENSMUST00000104391 136 ntBASIC21.14■□□□□ 0.97
Trim41Q5NCC3 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC21.14■□□□□ 0.97
Trim41Q5NCC3 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Trim41Q5NCC3 Gm13558-201ENSMUST00000140464 554 ntTSL 2 BASIC21.14■□□□□ 0.97
Trim41Q5NCC3 Gm23771-201ENSMUST00000178702 110 ntBASIC21.14■□□□□ 0.97
Trim41Q5NCC3 Gm5244-202ENSMUST00000189517 743 ntBASIC21.14■□□□□ 0.97
Trim41Q5NCC3 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trim41Q5NCC3 Gm44329-201ENSMUST00000197469 112 ntBASIC21.14■□□□□ 0.97
Trim41Q5NCC3 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim41Q5NCC3 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Trim41Q5NCC3 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Trim41Q5NCC3 Lce3d-201ENSMUST00000059053 491 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim41Q5NCC3 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim41Q5NCC3 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim41Q5NCC3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.97
Trim41Q5NCC3 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms