Protein–RNA interactions for Protein: Q3U962

Col5a2, Collagen alpha-2(V) chain, mousemouse

Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a2Q3U962 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.26□□□□□ -0.13
Col5a2Q3U962 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Gm2420-201ENSMUST00000119864 2149 ntBASIC14.26□□□□□ -0.13
Col5a2Q3U962 Spaca9-202ENSMUST00000124840 699 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC14.26□□□□□ -0.13
Col5a2Q3U962 AC238811.4-201ENSMUST00000178019 1246 ntBASIC14.26□□□□□ -0.13
Col5a2Q3U962 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 AC238940.3-201ENSMUST00000178830 1246 ntBASIC14.26□□□□□ -0.13
Col5a2Q3U962 Gm9507-202ENSMUST00000180157 654 ntBASIC14.26□□□□□ -0.13
Col5a2Q3U962 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Gm6390-201ENSMUST00000215034 589 ntBASIC14.26□□□□□ -0.13
Col5a2Q3U962 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC14.26□□□□□ -0.13
Col5a2Q3U962 AC158388.3-202ENSMUST00000225517 775 ntBASIC14.26□□□□□ -0.13
Col5a2Q3U962 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Gm36970-201ENSMUST00000193688 1859 ntBASIC14.26□□□□□ -0.13
Col5a2Q3U962 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Meioc-201ENSMUST00000100378 4573 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Col5a2Q3U962 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm11560-201ENSMUST00000117567 948 ntBASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm13351-201ENSMUST00000118087 414 ntBASIC14.25□□□□□ -0.13
Col5a2Q3U962 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm17214-201ENSMUST00000164501 541 ntBASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm8451-201ENSMUST00000170338 447 ntBASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm7719-201ENSMUST00000182374 975 ntBASIC14.25□□□□□ -0.13
Col5a2Q3U962 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Zfp1-202ENSMUST00000211926 1409 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm14005-208ENSMUST00000223654 681 ntBASIC14.25□□□□□ -0.13
Col5a2Q3U962 CT010506.1-201ENSMUST00000223673 349 ntBASIC14.25□□□□□ -0.13
Col5a2Q3U962 AC154361.2-201ENSMUST00000224747 943 ntBASIC14.25□□□□□ -0.13
Col5a2Q3U962 AC130477.1-201ENSMUST00000226982 420 ntBASIC14.25□□□□□ -0.13
Col5a2Q3U962 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm7536-201ENSMUST00000077389 444 ntBASIC14.25□□□□□ -0.13
Col5a2Q3U962 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm5453-201ENSMUST00000080866 447 ntBASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm10263-201ENSMUST00000085163 300 ntBASIC14.25□□□□□ -0.13
Col5a2Q3U962 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Col5a2Q3U962 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm9673-201ENSMUST00000119287 781 ntBASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Gm25554-201ENSMUST00000158075 113 ntBASIC14.25□□□□□ -0.13
Col5a2Q3U962 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Col5a2Q3U962 CT009546.1-201ENSMUST00000222573 1120 ntBASIC14.25□□□□□ -0.13
Col5a2Q3U962 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC14.25□□□□□ -0.13
Col5a2Q3U962 Olfr981-201ENSMUST00000059859 997 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms