Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.75■□□□□ 0.43
GABPAQ06546 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
GABPAQ06546 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
GABPAQ06546 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.75■□□□□ 0.43
GABPAQ06546 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
GABPAQ06546 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GABPAQ06546 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GABPAQ06546 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
GABPAQ06546 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC17.75■□□□□ 0.43
GABPAQ06546 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.75■□□□□ 0.43
GABPAQ06546 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GABPAQ06546 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GABPAQ06546 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
GABPAQ06546 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.75■□□□□ 0.43
GABPAQ06546 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.75■□□□□ 0.43
GABPAQ06546 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC17.75■□□□□ 0.43
GABPAQ06546 AC091804.1-201ENST00000486888 567 ntBASIC17.75■□□□□ 0.43
GABPAQ06546 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC17.75■□□□□ 0.43
GABPAQ06546 AC005730.2-201ENST00000564549 1184 ntBASIC17.75■□□□□ 0.43
GABPAQ06546 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.75■□□□□ 0.43
GABPAQ06546 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.75■□□□□ 0.43
GABPAQ06546 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC17.75■□□□□ 0.43
GABPAQ06546 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.75■□□□□ 0.43
GABPAQ06546 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GABPAQ06546 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.75■□□□□ 0.43
GABPAQ06546 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GABPAQ06546 PAUPAR-201ENST00000630360 2965 ntBASIC17.75■□□□□ 0.43
GABPAQ06546 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.75■□□□□ 0.43
GABPAQ06546 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
GABPAQ06546 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GABPAQ06546 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC17.75■□□□□ 0.43
GABPAQ06546 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GABPAQ06546 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
GABPAQ06546 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
GABPAQ06546 PKD1P5-201ENST00000532415 10291 ntBASIC17.74■□□□□ 0.43
GABPAQ06546 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
GABPAQ06546 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.74■□□□□ 0.43
GABPAQ06546 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.74■□□□□ 0.43
GABPAQ06546 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 AC023090.2-201ENST00000625182 2110 ntBASIC17.74■□□□□ 0.43
GABPAQ06546 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
GABPAQ06546 AC020910.5-201ENST00000623668 1865 ntBASIC17.74■□□□□ 0.43
GABPAQ06546 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 PTPA-218ENST00000435132 618 ntTSL 2 BASIC17.74■□□□□ 0.43
GABPAQ06546 BX284668.4-201ENST00000453917 508 ntBASIC17.74■□□□□ 0.43
GABPAQ06546 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 AC126915.1-201ENST00000522847 1038 ntBASIC17.74■□□□□ 0.43
GABPAQ06546 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.74■□□□□ 0.43
GABPAQ06546 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC17.74■□□□□ 0.43
GABPAQ06546 AL606495.2-201ENST00000605867 535 ntBASIC17.74■□□□□ 0.43
GABPAQ06546 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.74■□□□□ 0.43
GABPAQ06546 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
GABPAQ06546 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.74■□□□□ 0.43
GABPAQ06546 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.74■□□□□ 0.43
GABPAQ06546 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
GABPAQ06546 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
GABPAQ06546 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
GABPAQ06546 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
GABPAQ06546 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC17.73■□□□□ 0.43
GABPAQ06546 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.73■□□□□ 0.43
GABPAQ06546 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
GABPAQ06546 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.73■□□□□ 0.43
GABPAQ06546 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.73■□□□□ 0.43
GABPAQ06546 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.73■□□□□ 0.43
GABPAQ06546 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GABPAQ06546 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC17.73■□□□□ 0.43
GABPAQ06546 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.73■□□□□ 0.43
GABPAQ06546 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC17.73■□□□□ 0.43
GABPAQ06546 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.73■□□□□ 0.43
GABPAQ06546 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC17.73■□□□□ 0.43
GABPAQ06546 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC17.73■□□□□ 0.43
GABPAQ06546 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC17.73■□□□□ 0.43
GABPAQ06546 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
GABPAQ06546 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.73■□□□□ 0.43
GABPAQ06546 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17.73■□□□□ 0.43
GABPAQ06546 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
GABPAQ06546 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.73■□□□□ 0.43
GABPAQ06546 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
GABPAQ06546 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC17.73■□□□□ 0.43
GABPAQ06546 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
GABPAQ06546 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms