Protein–RNA interactions for Protein: Q03404

Tff2, Trefoil factor 2, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff2Q03404 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tff2Q03404 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff2Q03404 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Tff2Q03404 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Tff2Q03404 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Tff2Q03404 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff2Q03404 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff2Q03404 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Tff2Q03404 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Pstpip2-201ENSMUST00000114741 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.34□□□□□ -0.27
Tff2Q03404 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Tff2Q03404 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Gm25076-201ENSMUST00000104098 132 ntBASIC13.34□□□□□ -0.27
Tff2Q03404 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Gm5714-201ENSMUST00000197343 566 ntBASIC13.34□□□□□ -0.27
Tff2Q03404 Gm44270-201ENSMUST00000203084 1234 ntBASIC13.34□□□□□ -0.27
Tff2Q03404 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Tff2Q03404 AC154184.3-201ENSMUST00000225620 1090 ntBASIC13.34□□□□□ -0.27
Tff2Q03404 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Irf1-203ENSMUST00000108922 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Tff2Q03404 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Tff2Q03404 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Gm17435-202ENSMUST00000212699 1998 ntBASIC13.34□□□□□ -0.27
Tff2Q03404 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Tff2Q03404 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Tff2Q03404 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.33□□□□□ -0.27
Tff2Q03404 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Tff2Q03404 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tff2Q03404 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff2Q03404 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tff2Q03404 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tff2Q03404 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.33□□□□□ -0.28
Tff2Q03404 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tff2Q03404 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff2Q03404 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff2Q03404 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff2Q03404 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff2Q03404 Gm25880-201ENSMUST00000104331 132 ntBASIC13.33□□□□□ -0.28
Tff2Q03404 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.33□□□□□ -0.28
Tff2Q03404 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.33□□□□□ -0.28
Tff2Q03404 Gm12628-201ENSMUST00000122193 382 ntBASIC13.33□□□□□ -0.28
Tff2Q03404 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC13.33□□□□□ -0.28
Tff2Q03404 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC13.33□□□□□ -0.28
Tff2Q03404 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC13.33□□□□□ -0.28
Tff2Q03404 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC13.33□□□□□ -0.28
Tff2Q03404 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tff2Q03404 Gm23218-201ENSMUST00000158124 276 ntBASIC13.33□□□□□ -0.28
Tff2Q03404 Gm15523-201ENSMUST00000160463 439 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tff2Q03404 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tff2Q03404 Gm21092-201ENSMUST00000178995 955 ntBASIC13.33□□□□□ -0.28
Tff2Q03404 Gm42518-201ENSMUST00000196277 938 ntBASIC13.33□□□□□ -0.28
Tff2Q03404 Gm37419-201ENSMUST00000210705 114 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Tff2Q03404 Gm2875-201ENSMUST00000211333 360 ntBASIC13.33□□□□□ -0.28
Tff2Q03404 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.33□□□□□ -0.28
Tff2Q03404 Gm5537-201ENSMUST00000091117 1252 ntBASIC13.33□□□□□ -0.28
Tff2Q03404 AC123834.1-201ENSMUST00000225346 2043 ntBASIC13.33□□□□□ -0.28
Tff2Q03404 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff2Q03404 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Tff2Q03404 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff2Q03404 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff2Q03404 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff2Q03404 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Tff2Q03404 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Tff2Q03404 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Tff2Q03404 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC13.32□□□□□ -0.28
Tff2Q03404 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff2Q03404 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff2Q03404 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff2Q03404 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff2Q03404 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff2Q03404 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Tff2Q03404 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff2Q03404 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Tff2Q03404 Gm44758-201ENSMUST00000206096 2068 ntBASIC13.32□□□□□ -0.28
Tff2Q03404 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Tff2Q03404 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Tff2Q03404 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Tff2Q03404 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms