Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smn1P97801 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC10.41□□□□□ -0.74
Smn1P97801 Gm13315-201ENSMUST00000120376 991 ntBASIC10.41□□□□□ -0.74
Smn1P97801 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Smn1P97801 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC10.41□□□□□ -0.74
Smn1P97801 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC10.41□□□□□ -0.74
Smn1P97801 Gm23984-201ENSMUST00000157139 203 ntBASIC10.41□□□□□ -0.74
Smn1P97801 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smn1P97801 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC10.41□□□□□ -0.74
Smn1P97801 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC10.41□□□□□ -0.74
Smn1P97801 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smn1P97801 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC10.41□□□□□ -0.74
Smn1P97801 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smn1P97801 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC10.41□□□□□ -0.74
Smn1P97801 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC10.41□□□□□ -0.74
Smn1P97801 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC10.41□□□□□ -0.74
Smn1P97801 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Smn1P97801 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smn1P97801 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smn1P97801 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.41□□□□□ -0.74
Smn1P97801 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smn1P97801 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smn1P97801 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smn1P97801 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smn1P97801 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smn1P97801 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smn1P97801 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Smn1P97801 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smn1P97801 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Smn1P97801 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smn1P97801 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Smn1P97801 AC122291.1-201ENSMUST00000228937 5748 ntBASIC10.4□□□□□ -0.74
Smn1P97801 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 Dph6-201ENSMUST00000028640 2632 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC10.4□□□□□ -0.74
Smn1P97801 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.4□□□□□ -0.74
Smn1P97801 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Smn1P97801 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Smn1P97801 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 Gm13050-201ENSMUST00000122149 1345 ntBASIC10.4□□□□□ -0.74
Smn1P97801 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC10.4□□□□□ -0.74
Smn1P97801 Gm13492-201ENSMUST00000119772 665 ntBASIC10.4□□□□□ -0.74
Smn1P97801 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC10.4□□□□□ -0.74
Smn1P97801 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.4□□□□□ -0.74
Smn1P97801 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Smn1P97801 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 Gm5637-201ENSMUST00000153890 1119 ntBASIC10.4□□□□□ -0.74
Smn1P97801 Gm22331-201ENSMUST00000158066 136 ntBASIC10.4□□□□□ -0.74
Smn1P97801 Gm5866-201ENSMUST00000177881 973 ntBASIC10.4□□□□□ -0.74
Smn1P97801 Gm45384-201ENSMUST00000210451 277 ntBASIC10.4□□□□□ -0.74
Smn1P97801 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Smn1P97801 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smn1P97801 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.75
Smn1P97801 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.75
Smn1P97801 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Dbx2-201ENSMUST00000054244 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC10.39□□□□□ -0.75
Smn1P97801 Gm3287-205ENSMUST00000228893 1332 ntBASIC10.39□□□□□ -0.75
Smn1P97801 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.39□□□□□ -0.75
Smn1P97801 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Ctnnb1-214ENSMUST00000178812 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Smn1P97801 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Smn1P97801 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Gm11918-201ENSMUST00000121660 179 ntBASIC10.39□□□□□ -0.75
Smn1P97801 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC10.39□□□□□ -0.75
Smn1P97801 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC10.39□□□□□ -0.75
Smn1P97801 Gm23119-201ENSMUST00000158610 140 ntBASIC10.39□□□□□ -0.75
Smn1P97801 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Smn1P97801 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC10.39□□□□□ -0.75
Smn1P97801 Gm7029-201ENSMUST00000173226 450 ntBASIC10.39□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms