Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC7.99□□□□□ -1.13
PrkdcP97313 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC7.99□□□□□ -1.13
PrkdcP97313 Gm15929-201ENSMUST00000138926 1161 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 H2afy3-201ENSMUST00000151919 1112 ntBASIC7.99□□□□□ -1.13
PrkdcP97313 Gm17221-201ENSMUST00000163909 481 ntBASIC7.99□□□□□ -1.13
PrkdcP97313 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC7.99□□□□□ -1.13
PrkdcP97313 Gm17073-201ENSMUST00000168069 556 ntBASIC7.99□□□□□ -1.13
PrkdcP97313 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
PrkdcP97313 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
PrkdcP97313 Gm43117-201ENSMUST00000198531 379 ntBASIC7.99□□□□□ -1.13
PrkdcP97313 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Gm9415-201ENSMUST00000200462 1321 ntBASIC7.99□□□□□ -1.13
PrkdcP97313 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC7.99□□□□□ -1.13
PrkdcP97313 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
PrkdcP97313 C330021F23Rik-204ENSMUST00000151633 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC7.99□□□□□ -1.13
PrkdcP97313 Gm9369-201ENSMUST00000196009 733 ntBASIC7.99□□□□□ -1.13
PrkdcP97313 C330021F23Rik-201ENSMUST00000086479 1111 ntAPPRIS P2 TSL 5 BASIC7.99□□□□□ -1.13
PrkdcP97313 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
PrkdcP97313 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC7.99□□□□□ -1.13
PrkdcP97313 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC7.99□□□□□ -1.13
PrkdcP97313 Gm42928-201ENSMUST00000197338 3339 ntBASIC7.99□□□□□ -1.13
PrkdcP97313 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
PrkdcP97313 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Gm5638-201ENSMUST00000118618 1258 ntBASIC7.99□□□□□ -1.13
PrkdcP97313 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC7.99□□□□□ -1.13
PrkdcP97313 Gm20610-201ENSMUST00000176406 587 ntTSL 5 BASIC7.99□□□□□ -1.13
PrkdcP97313 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC7.99□□□□□ -1.13
PrkdcP97313 Gm8601-201ENSMUST00000182096 909 ntBASIC7.99□□□□□ -1.13
PrkdcP97313 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC7.99□□□□□ -1.13
PrkdcP97313 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
PrkdcP97313 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC7.99□□□□□ -1.13
PrkdcP97313 Gm6741-201ENSMUST00000057074 1330 ntAPPRIS P1 BASIC7.99□□□□□ -1.13
PrkdcP97313 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC7.99□□□□□ -1.13
PrkdcP97313 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Mir453-201ENSMUST00000104732 82 ntBASIC7.98□□□□□ -1.13
PrkdcP97313 n-R5s130-201ENSMUST00000178128 119 ntBASIC7.98□□□□□ -1.13
PrkdcP97313 Gm24312-201ENSMUST00000178677 119 ntBASIC7.98□□□□□ -1.13
PrkdcP97313 n-R5s106-201ENSMUST00000179060 119 ntBASIC7.98□□□□□ -1.13
PrkdcP97313 n-R5s118-201ENSMUST00000179887 119 ntBASIC7.98□□□□□ -1.13
PrkdcP97313 Gm18014-201ENSMUST00000183369 817 ntBASIC7.98□□□□□ -1.13
PrkdcP97313 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 AC166902.2-202ENSMUST00000213191 1038 ntTSL 5 BASIC7.98□□□□□ -1.13
PrkdcP97313 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Gm18621-201ENSMUST00000222677 679 ntBASIC7.98□□□□□ -1.13
PrkdcP97313 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Gm44851-201ENSMUST00000205735 2309 ntBASIC7.98□□□□□ -1.13
PrkdcP97313 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC7.98□□□□□ -1.13
PrkdcP97313 H2-M10.1-201ENSMUST00000025322 1394 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC7.98□□□□□ -1.13
PrkdcP97313 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
PrkdcP97313 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC7.98□□□□□ -1.13
PrkdcP97313 Mir598-201ENSMUST00000102094 79 ntBASIC7.98□□□□□ -1.13
PrkdcP97313 Gm15329-201ENSMUST00000121408 155 ntBASIC7.98□□□□□ -1.13
PrkdcP97313 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Gm20483-201ENSMUST00000173162 851 ntTSL 2 BASIC7.98□□□□□ -1.13
PrkdcP97313 Gm5808-201ENSMUST00000178090 357 ntBASIC7.98□□□□□ -1.13
PrkdcP97313 AC107752.1-201ENSMUST00000219362 469 ntBASIC7.98□□□□□ -1.13
PrkdcP97313 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC7.98□□□□□ -1.13
PrkdcP97313 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC7.98□□□□□ -1.13
PrkdcP97313 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC7.98□□□□□ -1.13
PrkdcP97313 Mapk8-202ENSMUST00000111942 927 ntTSL 5 BASIC7.98□□□□□ -1.13
PrkdcP97313 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC7.98□□□□□ -1.13
PrkdcP97313 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC7.98□□□□□ -1.13
PrkdcP97313 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC7.98□□□□□ -1.13
PrkdcP97313 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC7.98□□□□□ -1.13
PrkdcP97313 AC159006.3-201ENSMUST00000226918 664 ntBASIC7.98□□□□□ -1.13
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms