Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
SgcbP82349 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC10.9□□□□□ -0.66
SgcbP82349 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.9□□□□□ -0.66
SgcbP82349 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.9□□□□□ -0.66
SgcbP82349 Gm13665-201ENSMUST00000120830 528 ntBASIC10.9□□□□□ -0.66
SgcbP82349 Gm12749-201ENSMUST00000122138 1159 ntBASIC10.9□□□□□ -0.66
SgcbP82349 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.9□□□□□ -0.66
SgcbP82349 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
SgcbP82349 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC10.9□□□□□ -0.66
SgcbP82349 Gm28913-201ENSMUST00000186240 364 ntTSL 3 BASIC10.9□□□□□ -0.66
SgcbP82349 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC10.9□□□□□ -0.66
SgcbP82349 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC10.9□□□□□ -0.66
SgcbP82349 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Taok1-202ENSMUST00000058496 12409 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
SgcbP82349 Cacna1s-204ENSMUST00000160641 6104 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
SgcbP82349 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SgcbP82349 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SgcbP82349 Gm2420-201ENSMUST00000119864 2149 ntBASIC10.9□□□□□ -0.67
SgcbP82349 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SgcbP82349 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC10.9□□□□□ -0.67
SgcbP82349 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
SgcbP82349 4930589L23Rik-201ENSMUST00000091023 1364 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
SgcbP82349 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
SgcbP82349 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC10.89□□□□□ -0.67
SgcbP82349 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.89□□□□□ -0.67
SgcbP82349 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
SgcbP82349 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Ttc17-203ENSMUST00000111237 4409 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SgcbP82349 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
SgcbP82349 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC10.89□□□□□ -0.67
SgcbP82349 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Gm26361-201ENSMUST00000158868 186 ntBASIC10.89□□□□□ -0.67
SgcbP82349 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Gm9230-201ENSMUST00000188228 532 ntBASIC10.89□□□□□ -0.67
SgcbP82349 Gm4857-201ENSMUST00000192718 785 ntBASIC10.89□□□□□ -0.67
SgcbP82349 Gm9678-201ENSMUST00000198979 1149 ntBASIC10.89□□□□□ -0.67
SgcbP82349 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Gm7619-201ENSMUST00000210649 1282 ntBASIC10.89□□□□□ -0.67
SgcbP82349 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC10.89□□□□□ -0.67
SgcbP82349 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
SgcbP82349 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SgcbP82349 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
SgcbP82349 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.89□□□□□ -0.67
SgcbP82349 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
SgcbP82349 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
SgcbP82349 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
SgcbP82349 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 AC107452.3-201ENSMUST00000228807 1308 ntBASIC10.88□□□□□ -0.67
SgcbP82349 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.88□□□□□ -0.67
SgcbP82349 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
SgcbP82349 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC10.88□□□□□ -0.67
SgcbP82349 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
SgcbP82349 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.88□□□□□ -0.67
SgcbP82349 Gm23912-201ENSMUST00000104687 87 ntBASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms