Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nup43P59235 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Nup43P59235 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Nup43P59235 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Lman1l-202ENSMUST00000093832 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.5□□□□□ -0.57
Nup43P59235 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Nup43P59235 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nup43P59235 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Gm11989-201ENSMUST00000117240 672 ntBASIC11.5□□□□□ -0.57
Nup43P59235 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Gm11362-201ENSMUST00000118838 850 ntBASIC11.5□□□□□ -0.57
Nup43P59235 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC11.5□□□□□ -0.57
Nup43P59235 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Nup43P59235 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC11.5□□□□□ -0.57
Nup43P59235 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC11.5□□□□□ -0.57
Nup43P59235 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC11.5□□□□□ -0.57
Nup43P59235 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC11.5□□□□□ -0.57
Nup43P59235 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.5□□□□□ -0.57
Nup43P59235 Rprl1-202ENSMUST00000198476 238 ntBASIC11.5□□□□□ -0.57
Nup43P59235 Gm19187-201ENSMUST00000206781 892 ntBASIC11.5□□□□□ -0.57
Nup43P59235 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.5□□□□□ -0.57
Nup43P59235 AC123665.1-201ENSMUST00000228204 438 ntBASIC11.5□□□□□ -0.57
Nup43P59235 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Nup43P59235 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.5□□□□□ -0.57
Nup43P59235 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.5□□□□□ -0.57
Nup43P59235 A430108G06Rik-201ENSMUST00000153461 1428 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Gm44207-201ENSMUST00000204568 1424 ntBASIC11.5□□□□□ -0.57
Nup43P59235 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Pcsk7-201ENSMUST00000039059 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC11.5□□□□□ -0.57
Nup43P59235 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Nup43P59235 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Nup43P59235 AC154671.1-201ENSMUST00000228617 1578 ntBASIC11.5□□□□□ -0.57
Nup43P59235 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nup43P59235 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.49□□□□□ -0.57
Nup43P59235 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.49□□□□□ -0.57
Nup43P59235 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Nup43P59235 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.49□□□□□ -0.57
Nup43P59235 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.49□□□□□ -0.57
Nup43P59235 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Il15ra-204ENSMUST00000114832 468 ntTSL 5 BASIC11.49□□□□□ -0.57
Nup43P59235 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Gm12012-201ENSMUST00000118857 1066 ntBASIC11.49□□□□□ -0.57
Nup43P59235 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.49□□□□□ -0.57
Nup43P59235 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC11.49□□□□□ -0.57
Nup43P59235 Gm32999-201ENSMUST00000192693 562 ntBASIC11.49□□□□□ -0.57
Nup43P59235 Gm45598-202ENSMUST00000210719 986 ntBASIC11.49□□□□□ -0.57
Nup43P59235 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11.49□□□□□ -0.57
Nup43P59235 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC11.49□□□□□ -0.57
Nup43P59235 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nup43P59235 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nup43P59235 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.49□□□□□ -0.57
Nup43P59235 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nup43P59235 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC11.49□□□□□ -0.57
Nup43P59235 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Nup43P59235 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Nup43P59235 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC11.49□□□□□ -0.57
Nup43P59235 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Nup43P59235 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms