Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.12□□□□□ -0.63
Cdh11P55288 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cdh11P55288 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.11□□□□□ -0.63
Cdh11P55288 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Cdh11P55288 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdh11P55288 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdh11P55288 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Gm13342-201ENSMUST00000121055 207 ntBASIC11.11□□□□□ -0.63
Cdh11P55288 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC11.11□□□□□ -0.63
Cdh11P55288 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC11.11□□□□□ -0.63
Cdh11P55288 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdh11P55288 Gm10608-202ENSMUST00000213924 676 ntBASIC11.11□□□□□ -0.63
Cdh11P55288 Cts7-204ENSMUST00000225321 1257 ntBASIC11.11□□□□□ -0.63
Cdh11P55288 Gm10371-202ENSMUST00000228010 1081 ntBASIC11.11□□□□□ -0.63
Cdh11P55288 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cdh11P55288 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
Cdh11P55288 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Cdh11P55288 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.11□□□□□ -0.63
Cdh11P55288 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC11.11□□□□□ -0.63
Cdh11P55288 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cdh11P55288 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.11□□□□□ -0.63
Cdh11P55288 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Dnmt3l-201ENSMUST00000000746 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cdh11P55288 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC11.1□□□□□ -0.63
Cdh11P55288 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cdh11P55288 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cdh11P55288 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.1□□□□□ -0.63
Cdh11P55288 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cdh11P55288 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC11.1□□□□□ -0.63
Cdh11P55288 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.1□□□□□ -0.63
Cdh11P55288 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC11.1□□□□□ -0.63
Cdh11P55288 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC11.1□□□□□ -0.63
Cdh11P55288 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.1□□□□□ -0.63
Cdh11P55288 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Gm3890-201ENSMUST00000182416 207 ntBASIC11.1□□□□□ -0.63
Cdh11P55288 Gm37489-201ENSMUST00000191883 159 ntBASIC11.1□□□□□ -0.63
Cdh11P55288 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC11.1□□□□□ -0.63
Cdh11P55288 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Cdh11P55288 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Cdh11P55288 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cdh11P55288 Gm38187-201ENSMUST00000195609 4709 ntBASIC11.1□□□□□ -0.63
Cdh11P55288 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms