Protein–RNA interactions for Protein: P54754

Ephb3, Ephrin type-B receptor 3, mousemouse

Known RBP Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ephb3P54754 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Ephb3P54754 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ephb3P54754 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ephb3P54754 Gm5939-201ENSMUST00000119613 2874 ntBASIC12.75□□□□□ -0.37
Ephb3P54754 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ephb3P54754 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Ephb3P54754 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ephb3P54754 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Ndufs4-201ENSMUST00000022286 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ephb3P54754 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.74□□□□□ -0.37
Ephb3P54754 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ephb3P54754 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ephb3P54754 Gm11511-201ENSMUST00000118146 540 ntBASIC12.74□□□□□ -0.37
Ephb3P54754 Gm12990-201ENSMUST00000120372 468 ntBASIC12.74□□□□□ -0.37
Ephb3P54754 Gm13328-201ENSMUST00000120816 1020 ntBASIC12.74□□□□□ -0.37
Ephb3P54754 Gm12164-201ENSMUST00000121695 551 ntBASIC12.74□□□□□ -0.37
Ephb3P54754 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.74□□□□□ -0.37
Ephb3P54754 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC12.74□□□□□ -0.37
Ephb3P54754 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Ephb3P54754 Gm23045-201ENSMUST00000175041 96 ntBASIC12.74□□□□□ -0.37
Ephb3P54754 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Gm2875-201ENSMUST00000211333 360 ntBASIC12.74□□□□□ -0.37
Ephb3P54754 Gm18041-201ENSMUST00000218210 618 ntBASIC12.74□□□□□ -0.37
Ephb3P54754 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.74□□□□□ -0.37
Ephb3P54754 AC121960.1-201ENSMUST00000227982 564 ntBASIC12.74□□□□□ -0.37
Ephb3P54754 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Ephb3P54754 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Ephb3P54754 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Ephb3P54754 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 4930486L24Rik-201ENSMUST00000091569 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.73□□□□□ -0.37
Ephb3P54754 Gm13600-201ENSMUST00000117949 744 ntBASIC12.73□□□□□ -0.37
Ephb3P54754 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC12.73□□□□□ -0.37
Ephb3P54754 Gm4654-201ENSMUST00000183305 982 ntBASIC12.73□□□□□ -0.37
Ephb3P54754 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.73□□□□□ -0.37
Ephb3P54754 AC159376.1-201ENSMUST00000218504 630 ntBASIC12.73□□□□□ -0.37
Ephb3P54754 Gm9139-201ENSMUST00000218817 700 ntBASIC12.73□□□□□ -0.37
Ephb3P54754 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.73□□□□□ -0.37
Ephb3P54754 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.73□□□□□ -0.37
Ephb3P54754 Slc6a18-204ENSMUST00000220650 1728 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 AC173482.6-201ENSMUST00000225889 1741 ntBASIC12.73□□□□□ -0.37
Ephb3P54754 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Ephb3P54754 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Ephb3P54754 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC12.73□□□□□ -0.37
Ephb3P54754 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ephb3P54754 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Ephb3P54754 Ttc17-202ENSMUST00000094801 3408 ntTSL 5 BASIC12.72□□□□□ -0.37
Ephb3P54754 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ephb3P54754 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ephb3P54754 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Ephb3P54754 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ephb3P54754 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Ephb3P54754 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms