Protein–RNA interactions for Protein: P51670

Ccl9, C-C motif chemokine 9, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl9P51670 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Ccl9P51670 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Ccl9P51670 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC10.66□□□□□ -0.7
Ccl9P51670 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccl9P51670 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Herc4-201ENSMUST00000020258 3898 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC10.66□□□□□ -0.7
Ccl9P51670 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.66□□□□□ -0.7
Ccl9P51670 Gm13829-201ENSMUST00000119600 138 ntBASIC10.66□□□□□ -0.7
Ccl9P51670 Gm13316-201ENSMUST00000140537 691 ntBASIC10.66□□□□□ -0.7
Ccl9P51670 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Gm5850-201ENSMUST00000192923 1206 ntBASIC10.66□□□□□ -0.7
Ccl9P51670 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccl9P51670 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC10.66□□□□□ -0.7
Ccl9P51670 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccl9P51670 AC126253.1-201ENSMUST00000227974 824 ntBASIC10.66□□□□□ -0.7
Ccl9P51670 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Ccl9P51670 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccl9P51670 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccl9P51670 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Ccl9P51670 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.66□□□□□ -0.7
Ccl9P51670 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccl9P51670 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC10.66□□□□□ -0.7
Ccl9P51670 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC10.65□□□□□ -0.7
Ccl9P51670 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Ccl9P51670 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ccl9P51670 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ccl9P51670 Gm23931-201ENSMUST00000103842 109 ntBASIC10.65□□□□□ -0.7
Ccl9P51670 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC10.65□□□□□ -0.7
Ccl9P51670 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.65□□□□□ -0.7
Ccl9P51670 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Gm9823-201ENSMUST00000051212 327 ntBASIC10.65□□□□□ -0.7
Ccl9P51670 Snora73a-201ENSMUST00000082453 205 ntBASIC10.65□□□□□ -0.7
Ccl9P51670 Gm24136-201ENSMUST00000083374 165 ntBASIC10.65□□□□□ -0.7
Ccl9P51670 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
Ccl9P51670 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ccl9P51670 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Ccl9P51670 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.65□□□□□ -0.7
Ccl9P51670 Phka2-203ENSMUST00000112377 3947 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Ccl9P51670 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Ccl9P51670 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Ccl9P51670 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Ccl9P51670 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Ccl9P51670 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Ccl9P51670 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Ccl9P51670 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.71
Ccl9P51670 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
Ccl9P51670 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms