Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Rfx3P48381 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.01□□□□□ -0.65
Rfx3P48381 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Rfx3P48381 Sh3pxd2a-201ENSMUST00000081619 10464 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11□□□□□ -0.65
Rfx3P48381 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11□□□□□ -0.65
Rfx3P48381 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rfx3P48381 AC126262.1-201ENSMUST00000221802 1904 ntBASIC11□□□□□ -0.65
Rfx3P48381 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC11□□□□□ -0.65
Rfx3P48381 Gm11964-201ENSMUST00000120982 444 ntBASIC11□□□□□ -0.65
Rfx3P48381 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
Rfx3P48381 Gm8565-201ENSMUST00000183259 1014 ntBASIC11□□□□□ -0.65
Rfx3P48381 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC11□□□□□ -0.65
Rfx3P48381 AC125350.2-201ENSMUST00000224737 727 ntBASIC11□□□□□ -0.65
Rfx3P48381 AC126253.1-201ENSMUST00000227974 824 ntBASIC11□□□□□ -0.65
Rfx3P48381 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC11□□□□□ -0.65
Rfx3P48381 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 n-R5s195-201ENSMUST00000082891 119 ntBASIC11□□□□□ -0.65
Rfx3P48381 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC11□□□□□ -0.65
Rfx3P48381 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Gm14132-201ENSMUST00000117188 1719 ntBASIC11□□□□□ -0.65
Rfx3P48381 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC11□□□□□ -0.65
Rfx3P48381 Gm2128-201ENSMUST00000108009 2560 ntBASIC11□□□□□ -0.65
Rfx3P48381 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Rfx3P48381 Gm43075-201ENSMUST00000198613 3905 ntBASIC11□□□□□ -0.65
Rfx3P48381 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Rfx3P48381 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11□□□□□ -0.65
Rfx3P48381 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Rfx3P48381 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rfx3P48381 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rfx3P48381 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.99□□□□□ -0.65
Rfx3P48381 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rfx3P48381 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC10.99□□□□□ -0.65
Rfx3P48381 Gm14660-201ENSMUST00000119809 575 ntBASIC10.99□□□□□ -0.65
Rfx3P48381 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Gm7809-201ENSMUST00000153199 742 ntBASIC10.99□□□□□ -0.65
Rfx3P48381 Gm8018-201ENSMUST00000173536 789 ntBASIC10.99□□□□□ -0.65
Rfx3P48381 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC10.99□□□□□ -0.65
Rfx3P48381 Gm44405-201ENSMUST00000198952 126 ntBASIC10.99□□□□□ -0.65
Rfx3P48381 Gm6007-201ENSMUST00000208170 823 ntBASIC10.99□□□□□ -0.65
Rfx3P48381 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Rfx3P48381 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC10.99□□□□□ -0.65
Rfx3P48381 Gm5781-201ENSMUST00000219792 443 ntBASIC10.99□□□□□ -0.65
Rfx3P48381 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Rfx3P48381 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Stk10-201ENSMUST00000102821 5026 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Rfx3P48381 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Lrrc57-203ENSMUST00000102498 1901 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Rfx3P48381 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Rfx3P48381 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC10.99□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms