Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfsf4P43488 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 4833422M21Rik-202ENSMUST00000181252 2410 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.74□□□□□ -0.53
Tnfsf4P43488 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfsf4P43488 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Tnfsf4P43488 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.74□□□□□ -0.53
Tnfsf4P43488 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Gm43321-201ENSMUST00000198897 2409 ntBASIC11.74□□□□□ -0.53
Tnfsf4P43488 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Tnfsf4P43488 Birc3-201ENSMUST00000013949 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Arhgef9-206ENSMUST00000113884 3784 ntTSL 5 BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.73□□□□□ -0.53
Tnfsf4P43488 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC11.73□□□□□ -0.53
Tnfsf4P43488 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Gm25261-201ENSMUST00000157416 134 ntBASIC11.73□□□□□ -0.53
Tnfsf4P43488 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Gm16379-201ENSMUST00000161469 348 ntBASIC11.73□□□□□ -0.53
Tnfsf4P43488 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Tnfsf4P43488 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Tnfsf4P43488 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Gm8762-201ENSMUST00000193486 339 ntBASIC11.73□□□□□ -0.53
Tnfsf4P43488 Mrpl30-205ENSMUST00000193673 662 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.73□□□□□ -0.53
Tnfsf4P43488 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Tnfsf4P43488 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Tnfsf4P43488 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms