Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC12.46□□□□□ -0.41
Mmp13P33435 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Mmp13P33435 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.46□□□□□ -0.41
Mmp13P33435 Gm12241-201ENSMUST00000118330 726 ntBASIC12.46□□□□□ -0.41
Mmp13P33435 Gm13492-201ENSMUST00000119772 665 ntBASIC12.46□□□□□ -0.41
Mmp13P33435 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.46□□□□□ -0.41
Mmp13P33435 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC12.46□□□□□ -0.41
Mmp13P33435 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Mmp13P33435 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Mmp13P33435 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Mmp13P33435 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC12.46□□□□□ -0.41
Mmp13P33435 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC12.46□□□□□ -0.41
Mmp13P33435 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.46□□□□□ -0.41
Mmp13P33435 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.46□□□□□ -0.41
Mmp13P33435 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.46□□□□□ -0.41
Mmp13P33435 AC153845.2-201ENSMUST00000217535 673 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Mmp13P33435 Gm17383-201ENSMUST00000078739 1041 ntBASIC12.46□□□□□ -0.41
Mmp13P33435 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Mmp13P33435 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Mmp13P33435 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp13P33435 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp13P33435 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp13P33435 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Mmp13P33435 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp13P33435 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Mmp13P33435 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp13P33435 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp13P33435 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.46□□□□□ -0.42
Mmp13P33435 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp13P33435 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp13P33435 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp13P33435 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Mmp13P33435 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Mmp13P33435 Gm10434-201ENSMUST00000101158 471 ntBASIC12.45□□□□□ -0.42
Mmp13P33435 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Mmp13P33435 Gm15370-201ENSMUST00000117158 253 ntBASIC12.45□□□□□ -0.42
Mmp13P33435 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC12.45□□□□□ -0.42
Mmp13P33435 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Mospd4-201ENSMUST00000180618 576 ntBASIC12.45□□□□□ -0.42
Mmp13P33435 Gm4034-201ENSMUST00000187674 480 ntBASIC12.45□□□□□ -0.42
Mmp13P33435 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.45□□□□□ -0.42
Mmp13P33435 Gm9368-201ENSMUST00000219348 831 ntBASIC12.45□□□□□ -0.42
Mmp13P33435 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Mmp13P33435 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Mmp13P33435 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.45□□□□□ -0.42
Mmp13P33435 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Mmp13P33435 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Gm2694-202ENSMUST00000180806 1452 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.45□□□□□ -0.42
Mmp13P33435 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Mmp13P33435 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Mmp13P33435 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Mmp13P33435 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.44□□□□□ -0.42
Mmp13P33435 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Brd3-210ENSMUST00000164296 2791 ntAPPRIS P3 TSL 5 BASIC12.44□□□□□ -0.42
Mmp13P33435 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC12.44□□□□□ -0.42
Mmp13P33435 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Mmp13P33435 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Mmp13P33435 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Mmp13P33435 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms