Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.32□□□□□ -0.44
VimP20152 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VimP20152 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.32□□□□□ -0.44
VimP20152 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
VimP20152 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Gm37969-201ENSMUST00000195777 3409 ntBASIC12.31□□□□□ -0.44
VimP20152 Clcn4-201ENSMUST00000000619 4607 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
VimP20152 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Tmem25-202ENSMUST00000114705 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
VimP20152 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.31□□□□□ -0.44
VimP20152 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
VimP20152 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Gm4995-201ENSMUST00000117247 432 ntBASIC12.31□□□□□ -0.44
VimP20152 Gm13689-201ENSMUST00000119360 685 ntBASIC12.31□□□□□ -0.44
VimP20152 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC12.31□□□□□ -0.44
VimP20152 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.31□□□□□ -0.44
VimP20152 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.31□□□□□ -0.44
VimP20152 Gm17837-201ENSMUST00000186435 985 ntBASIC12.31□□□□□ -0.44
VimP20152 Gm4034-201ENSMUST00000187674 480 ntBASIC12.31□□□□□ -0.44
VimP20152 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC12.31□□□□□ -0.44
VimP20152 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC12.31□□□□□ -0.44
VimP20152 Gm7775-201ENSMUST00000218871 853 ntBASIC12.31□□□□□ -0.44
VimP20152 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Itm2b-204ENSMUST00000228637 783 ntBASIC12.31□□□□□ -0.44
VimP20152 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
VimP20152 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC12.31□□□□□ -0.44
VimP20152 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
VimP20152 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC12.31□□□□□ -0.44
VimP20152 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
VimP20152 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
VimP20152 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.3□□□□□ -0.44
VimP20152 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VimP20152 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC12.3□□□□□ -0.44
VimP20152 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.3□□□□□ -0.44
VimP20152 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
VimP20152 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC12.3□□□□□ -0.44
VimP20152 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VimP20152 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
VimP20152 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VimP20152 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VimP20152 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
VimP20152 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.3□□□□□ -0.44
VimP20152 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VimP20152 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.3□□□□□ -0.44
VimP20152 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.3□□□□□ -0.44
VimP20152 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VimP20152 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VimP20152 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VimP20152 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
VimP20152 Gm38292-201ENSMUST00000192646 3045 ntBASIC12.3□□□□□ -0.44
VimP20152 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VimP20152 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.3□□□□□ -0.44
VimP20152 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
VimP20152 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VimP20152 2900069G24Rik-201ENSMUST00000192780 1311 ntBASIC12.3□□□□□ -0.44
VimP20152 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VimP20152 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
VimP20152 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VimP20152 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
VimP20152 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
VimP20152 Myo1b-201ENSMUST00000018561 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
VimP20152 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.3□□□□□ -0.44
VimP20152 Gm21939-201ENSMUST00000221137 2773 ntBASIC12.3□□□□□ -0.44
VimP20152 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
VimP20152 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
VimP20152 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Angptl4-201ENSMUST00000002360 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
VimP20152 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
VimP20152 Gm38194-201ENSMUST00000194529 2211 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms