Protein–RNA interactions for Protein: P11370

Fv4, Retrovirus-related Env polyprotein from Fv-4 locus, mousemouse

Predictions only

Length 679 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fv4P11370 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Gm15172-201ENSMUST00000118945 1046 ntBASIC11.75□□□□□ -0.53
Fv4P11370 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC11.75□□□□□ -0.53
Fv4P11370 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC11.75□□□□□ -0.53
Fv4P11370 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.75□□□□□ -0.53
Fv4P11370 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Fv4P11370 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC11.75□□□□□ -0.53
Fv4P11370 Gm17823-201ENSMUST00000217830 1006 ntBASIC11.75□□□□□ -0.53
Fv4P11370 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 CU024892.2-201ENSMUST00000224608 832 ntBASIC11.75□□□□□ -0.53
Fv4P11370 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 6430571L13Rik-201ENSMUST00000042581 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Fv4P11370 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Fv4P11370 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.75□□□□□ -0.53
Fv4P11370 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Fv4P11370 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
Fv4P11370 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Fv4P11370 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.75□□□□□ -0.53
Fv4P11370 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Fv4P11370 Slc39a3-205ENSMUST00000168076 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Fv4P11370 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.74□□□□□ -0.53
Fv4P11370 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.74□□□□□ -0.53
Fv4P11370 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Fv4P11370 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Fv4P11370 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Ercc8-201ENSMUST00000054835 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Fv4P11370 Gm23931-201ENSMUST00000103842 109 ntBASIC11.74□□□□□ -0.53
Fv4P11370 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Snora78-201ENSMUST00000158630 128 ntBASIC11.74□□□□□ -0.53
Fv4P11370 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC11.74□□□□□ -0.53
Fv4P11370 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.74□□□□□ -0.53
Fv4P11370 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Fv4P11370 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 AC153929.1-201ENSMUST00000219009 303 ntBASIC11.74□□□□□ -0.53
Fv4P11370 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Fv4P11370 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Fv4P11370 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Fv4P11370 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fv4P11370 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.73□□□□□ -0.53
Fv4P11370 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Fv4P11370 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Fv4P11370 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Fv4P11370 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Fv4P11370 Gm13829-201ENSMUST00000119600 138 ntBASIC11.73□□□□□ -0.53
Fv4P11370 Gm14247-201ENSMUST00000120950 237 ntBASIC11.73□□□□□ -0.53
Fv4P11370 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.73□□□□□ -0.53
Fv4P11370 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC11.73□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms