Protein–RNA interactions for Protein: P10146

Ccl1, C-C motif chemokine 1, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl1P10146 AC165260.3-202ENSMUST00000224550 1031 ntBASIC9.4□□□□□ -0.9
Ccl1P10146 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl1P10146 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl1P10146 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl1P10146 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC9.4□□□□□ -0.9
Ccl1P10146 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl1P10146 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl1P10146 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl1P10146 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl1P10146 H2-M2-201ENSMUST00000016427 1550 ntAPPRIS P3 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl1P10146 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.9
Ccl1P10146 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl1P10146 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl1P10146 Zfp217-201ENSMUST00000063710 5685 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.9
Ccl1P10146 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl1P10146 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl1P10146 Fmnl1-207ENSMUST00000218163 3824 ntAPPRIS ALT2 TSL 5 BASIC9.4□□□□□ -0.91
Ccl1P10146 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl1P10146 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC9.4□□□□□ -0.91
Ccl1P10146 Tenm2-208ENSMUST00000163524 8668 ntAPPRIS P2 TSL 5 BASIC9.4□□□□□ -0.91
Ccl1P10146 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.4□□□□□ -0.91
Ccl1P10146 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC9.4□□□□□ -0.91
Ccl1P10146 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.91
Ccl1P10146 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Ccl1P10146 AC122811.1-201ENSMUST00000222257 2921 ntBASIC9.39□□□□□ -0.91
Ccl1P10146 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Madd-204ENSMUST00000077941 5990 ntAPPRIS ALT2 TSL 2 BASIC9.39□□□□□ -0.91
Ccl1P10146 Madd-205ENSMUST00000099723 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl1P10146 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Ccl1P10146 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Ccl1P10146 Gm6992-201ENSMUST00000217973 1607 ntBASIC9.39□□□□□ -0.91
Ccl1P10146 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl1P10146 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Ccl1P10146 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Ccl1P10146 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Ccl1P10146 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Loxhd1-202ENSMUST00000096547 6595 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Ppp4r1-201ENSMUST00000073104 3850 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl1P10146 Gm5354-201ENSMUST00000182417 973 ntBASIC9.39□□□□□ -0.91
Ccl1P10146 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC9.39□□□□□ -0.91
Ccl1P10146 Gm4034-201ENSMUST00000187674 480 ntBASIC9.39□□□□□ -0.91
Ccl1P10146 AC151286.1-201ENSMUST00000198489 145 ntBASIC9.39□□□□□ -0.91
Ccl1P10146 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC9.39□□□□□ -0.91
Ccl1P10146 Gm6983-201ENSMUST00000214912 628 ntBASIC9.39□□□□□ -0.91
Ccl1P10146 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl1P10146 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl1P10146 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Ccl1P10146 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC9.39□□□□□ -0.91
Ccl1P10146 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl1P10146 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.39□□□□□ -0.91
Ccl1P10146 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Pde5a-201ENSMUST00000066728 6939 ntAPPRIS P2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Cdh20-201ENSMUST00000062528 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Vps54-202ENSMUST00000109578 4273 ntAPPRIS ALT2 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Nr1h3-203ENSMUST00000111355 1672 ntTSL 5 BASIC9.39□□□□□ -0.91
Ccl1P10146 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC9.39□□□□□ -0.91
Ccl1P10146 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Cpa5-201ENSMUST00000062758 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.39□□□□□ -0.91
Ccl1P10146 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl1P10146 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl1P10146 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl1P10146 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl1P10146 Tmcc1-210ENSMUST00000204353 2851 ntAPPRIS ALT2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl1P10146 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl1P10146 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl1P10146 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl1P10146 Xirp1-201ENSMUST00000111635 5839 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl1P10146 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC9.38□□□□□ -0.91
Ccl1P10146 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl1P10146 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl1P10146 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl1P10146 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC9.38□□□□□ -0.91
Ccl1P10146 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC9.38□□□□□ -0.91
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms