Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Slc1a6O35544 Gm23912-201ENSMUST00000104687 87 ntBASIC11.98□□□□□ -0.49
Slc1a6O35544 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC11.98□□□□□ -0.49
Slc1a6O35544 Gm8515-201ENSMUST00000194852 576 ntBASIC11.98□□□□□ -0.49
Slc1a6O35544 Gm44405-201ENSMUST00000198952 126 ntBASIC11.98□□□□□ -0.49
Slc1a6O35544 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.98□□□□□ -0.49
Slc1a6O35544 Gm22058-201ENSMUST00000083393 310 ntBASIC11.98□□□□□ -0.49
Slc1a6O35544 Gm5356-201ENSMUST00000093326 615 ntBASIC11.98□□□□□ -0.49
Slc1a6O35544 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Slc1a6O35544 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Slc1a6O35544 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.98□□□□□ -0.49
Slc1a6O35544 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Trpv4-201ENSMUST00000071968 3228 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc1a6O35544 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.97□□□□□ -0.49
Slc1a6O35544 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Slc1a6O35544 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Fcrl1-203ENSMUST00000167200 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Cluap1-201ENSMUST00000040881 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Slc1a6O35544 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.97□□□□□ -0.49
Slc1a6O35544 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Gm11918-201ENSMUST00000121660 179 ntBASIC11.97□□□□□ -0.49
Slc1a6O35544 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC11.97□□□□□ -0.49
Slc1a6O35544 Gm24644-201ENSMUST00000157114 139 ntBASIC11.97□□□□□ -0.49
Slc1a6O35544 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.97□□□□□ -0.49
Slc1a6O35544 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC11.97□□□□□ -0.49
Slc1a6O35544 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC11.97□□□□□ -0.49
Slc1a6O35544 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.97□□□□□ -0.49
Slc1a6O35544 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.97□□□□□ -0.49
Slc1a6O35544 Gm10076-201ENSMUST00000073238 384 ntBASIC11.97□□□□□ -0.49
Slc1a6O35544 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC11.97□□□□□ -0.49
Slc1a6O35544 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Slc1a6O35544 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Slc1a6O35544 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
Slc1a6O35544 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC11.97□□□□□ -0.49
Slc1a6O35544 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Slc1a6O35544 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc1a6O35544 Gm38194-201ENSMUST00000194529 2211 ntBASIC11.96□□□□□ -0.49
Slc1a6O35544 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC11.96□□□□□ -0.49
Slc1a6O35544 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.96□□□□□ -0.49
Slc1a6O35544 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc1a6O35544 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.96□□□□□ -0.49
Slc1a6O35544 Gm20658-201ENSMUST00000175871 1489 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Slc1a6O35544 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Slc1a6O35544 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Slc1a6O35544 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Slc1a6O35544 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc1a6O35544 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc1a6O35544 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Slc1a6O35544 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.96□□□□□ -0.49
Slc1a6O35544 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc1a6O35544 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Slc1a6O35544 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms