Protein–RNA interactions for Protein: O35526

Stx1a, Syntaxin-1A, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stx1aO35526 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.66□□□□□ -0.22
Stx1aO35526 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Stx1aO35526 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Stx1aO35526 Gm13736-201ENSMUST00000119272 253 ntBASIC13.66□□□□□ -0.22
Stx1aO35526 Gm12502-201ENSMUST00000120197 444 ntBASIC13.66□□□□□ -0.22
Stx1aO35526 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Stx1aO35526 Gm6745-201ENSMUST00000199216 526 ntBASIC13.66□□□□□ -0.22
Stx1aO35526 Gm5904-201ENSMUST00000210286 865 ntBASIC13.66□□□□□ -0.22
Stx1aO35526 Gm39404-201ENSMUST00000216350 313 ntBASIC13.66□□□□□ -0.22
Stx1aO35526 Dhrs4-202ENSMUST00000226168 828 ntBASIC13.66□□□□□ -0.22
Stx1aO35526 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Stx1aO35526 Gm10076-201ENSMUST00000073238 384 ntBASIC13.66□□□□□ -0.22
Stx1aO35526 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Stx1aO35526 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Stx1aO35526 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Stx1aO35526 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Stx1aO35526 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Stx1aO35526 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Stx1aO35526 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
Stx1aO35526 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Stx1aO35526 AC124397.2-201ENSMUST00000225575 2215 ntBASIC13.66□□□□□ -0.22
Stx1aO35526 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Stx1aO35526 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Stx1aO35526 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Stx1aO35526 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Stx1aO35526 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Stx1aO35526 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC13.65□□□□□ -0.22
Stx1aO35526 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
Stx1aO35526 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Stx1aO35526 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.65□□□□□ -0.22
Stx1aO35526 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Stx1aO35526 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.65□□□□□ -0.22
Stx1aO35526 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.65□□□□□ -0.22
Stx1aO35526 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Stx1aO35526 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.65□□□□□ -0.22
Stx1aO35526 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Stx1aO35526 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Stx1aO35526 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC13.65□□□□□ -0.22
Stx1aO35526 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Stx1aO35526 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Stx1aO35526 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.64□□□□□ -0.23
Stx1aO35526 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Stx1aO35526 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 Gsdme-205ENSMUST00000170142 2133 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC13.64□□□□□ -0.23
Stx1aO35526 Tpcn2-201ENSMUST00000058022 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC13.64□□□□□ -0.23
Stx1aO35526 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.64□□□□□ -0.23
Stx1aO35526 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Stx1aO35526 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.64□□□□□ -0.23
Stx1aO35526 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Stx1aO35526 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 Gm13342-201ENSMUST00000121055 207 ntBASIC13.64□□□□□ -0.23
Stx1aO35526 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.64□□□□□ -0.23
Stx1aO35526 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 Gm5781-201ENSMUST00000219792 443 ntBASIC13.64□□□□□ -0.23
Stx1aO35526 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.64□□□□□ -0.23
Stx1aO35526 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.64□□□□□ -0.23
Stx1aO35526 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Stx1aO35526 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 Gm10268-201ENSMUST00000085340 555 ntBASIC13.64□□□□□ -0.23
Stx1aO35526 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Stx1aO35526 Lcp2-202ENSMUST00000109329 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Stx1aO35526 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Stx1aO35526 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms