Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ebf3O08791 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Wdfy1-204ENSMUST00000113512 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Ebf3O08791 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Ebf3O08791 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ebf3O08791 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Ebf3O08791 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ebf3O08791 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.68□□□□□ -0.38
Ebf3O08791 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ebf3O08791 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Ebf3O08791 Gm23949-201ENSMUST00000104027 127 ntBASIC12.68□□□□□ -0.38
Ebf3O08791 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC12.68□□□□□ -0.38
Ebf3O08791 Gm9062-201ENSMUST00000117712 727 ntBASIC12.68□□□□□ -0.38
Ebf3O08791 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.68□□□□□ -0.38
Ebf3O08791 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ebf3O08791 Gm5732-201ENSMUST00000182596 1007 ntBASIC12.68□□□□□ -0.38
Ebf3O08791 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.68□□□□□ -0.38
Ebf3O08791 Gm28071-201ENSMUST00000190355 478 ntBASIC12.68□□□□□ -0.38
Ebf3O08791 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.68□□□□□ -0.38
Ebf3O08791 AY036118-201ENSMUST00000200021 923 ntBASIC12.68□□□□□ -0.38
Ebf3O08791 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.68□□□□□ -0.38
Ebf3O08791 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.68□□□□□ -0.38
Ebf3O08791 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Plekhg6-201ENSMUST00000042647 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Sin3b-201ENSMUST00000004494 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Ebf3O08791 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ebf3O08791 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.68□□□□□ -0.38
Ebf3O08791 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.67□□□□□ -0.38
Ebf3O08791 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ebf3O08791 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.67□□□□□ -0.38
Ebf3O08791 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
Ebf3O08791 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.67□□□□□ -0.38
Ebf3O08791 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ebf3O08791 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.67□□□□□ -0.38
Ebf3O08791 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf3O08791 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf3O08791 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf3O08791 Gm44758-201ENSMUST00000206096 2068 ntBASIC12.66□□□□□ -0.38
Ebf3O08791 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC12.66□□□□□ -0.38
Ebf3O08791 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf3O08791 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf3O08791 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.66□□□□□ -0.38
Ebf3O08791 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf3O08791 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ebf3O08791 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms