Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 CT010480.4-201ENSMUST00000224654 2283 ntBASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Atf3-203ENSMUST00000195117 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Gm44106-201ENSMUST00000203153 1599 ntBASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Gm40332-201ENSMUST00000199847 938 ntBASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Gm43851-201ENSMUST00000200726 327 ntTSL 3 BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Nrf1-201ENSMUST00000004761 1589 ntTSL 5 BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Prim2-201ENSMUST00000027312 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 AC110091.3-201ENSMUST00000213406 1304 ntTSL 5 BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Gm5270-201ENSMUST00000121506 1002 ntBASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Col6a3E9PWQ3 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a3E9PWQ3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a3E9PWQ3 Gm8146-201ENSMUST00000192106 1847 ntBASIC11.77□□□□□ -0.52
Col6a3E9PWQ3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a3E9PWQ3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a3E9PWQ3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a3E9PWQ3 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a3E9PWQ3 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a3E9PWQ3 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a3E9PWQ3 Gm5191-201ENSMUST00000222882 1236 ntBASIC11.77□□□□□ -0.52
Col6a3E9PWQ3 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a3E9PWQ3 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a3E9PWQ3 Olfr1535-201ENSMUST00000068163 981 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
Col6a3E9PWQ3 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Col6a3E9PWQ3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
Col6a3E9PWQ3 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Gm15720-201ENSMUST00000117133 282 ntBASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Gm14247-201ENSMUST00000120950 237 ntBASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 AC132384.2-201ENSMUST00000218018 526 ntBASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 AC163638.2-201ENSMUST00000224920 827 ntBASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Olfr1511-201ENSMUST00000078171 957 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Gm14398-201ENSMUST00000117287 1073 ntBASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 AC156633.1-201ENSMUST00000215971 614 ntTSL 2 BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Cby1-201ENSMUST00000023064 1119 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Gimap7-201ENSMUST00000052503 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Col6a3E9PWQ3 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Srpk3-201ENSMUST00000002081 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Ccser2-203ENSMUST00000182042 1420 ntTSL 5 BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Col6a3E9PWQ3 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms