Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Gm24830-201ENSMUST00000102024 166 ntBASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 4930589O11Rik-201ENSMUST00000200768 920 ntBASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Gm39404-201ENSMUST00000216350 313 ntBASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Snora73a-201ENSMUST00000082453 205 ntBASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Gm26232-201ENSMUST00000083360 166 ntBASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Rnu1b6-201ENSMUST00000083839 166 ntBASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Sec23a-201ENSMUST00000021375 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Ccdc194A0A140LIT1 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Kcnma1-205ENSMUST00000145596 12094 ntAPPRIS ALT2 BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Gm15824-201ENSMUST00000119516 955 ntBASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Gm14999-201ENSMUST00000121039 624 ntBASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Gm5637-201ENSMUST00000153890 1119 ntBASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Gm8494-201ENSMUST00000178171 1233 ntBASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Gm45784-201ENSMUST00000188360 142 ntBASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Tmod2-201ENSMUST00000064433 9884 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Rgr-203ENSMUST00000225070 4704 ntBASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ccdc194A0A140LIT1 Armcx4-201ENSMUST00000124226 7996 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ccdc194A0A140LIT1 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms