Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Gm14314-201ENSMUST00000118225 1015 ntBASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Mup-ps26-201ENSMUST00000121751 202 ntBASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Plac9a-202ENSMUST00000183431 536 ntTSL 3 BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Plac9b-204ENSMUST00000184675 536 ntTSL 3 BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Insig2-214ENSMUST00000186915 674 ntTSL 3 BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Gm9540-201ENSMUST00000188230 478 ntBASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Gm18711-201ENSMUST00000199341 750 ntBASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Gm7600-201ENSMUST00000209657 785 ntBASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Gm45398-201ENSMUST00000210561 165 ntBASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.96□□□□□ -0.49
Rrp8Q9DB85 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Rrp8Q9DB85 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
Rrp8Q9DB85 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rrp8Q9DB85 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rrp8Q9DB85 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC11.96□□□□□ -0.5
Rrp8Q9DB85 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Rrp8Q9DB85 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rrp8Q9DB85 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Rrp8Q9DB85 Plcg1-203ENSMUST00000109462 5107 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Gm44891-201ENSMUST00000208817 2223 ntBASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Gm26286-201ENSMUST00000104166 134 ntBASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Gm23912-201ENSMUST00000104687 87 ntBASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Gm11509-201ENSMUST00000117358 325 ntBASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Gm11663-201ENSMUST00000117888 290 ntBASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Gm8199-201ENSMUST00000121323 823 ntBASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Gm19287-201ENSMUST00000203190 358 ntBASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Gm7395-201ENSMUST00000216059 1045 ntBASIC11.95□□□□□ -0.5
Rrp8Q9DB85 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Psmg2-201ENSMUST00000025418 1059 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Rrp8Q9DB85 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Cog3-203ENSMUST00000227473 4197 ntBASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC11.94□□□□□ -0.5
Rrp8Q9DB85 AC091458.1-201ENSMUST00000220902 1361 ntBASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Gm37795-201ENSMUST00000194216 2459 ntBASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Kansl3-201ENSMUST00000010597 4663 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Gm8956-201ENSMUST00000203939 825 ntBASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Rrp8Q9DB85 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms