Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
U2af1Q9D883 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
U2af1Q9D883 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC16.01■□□□□ 0.15
U2af1Q9D883 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
U2af1Q9D883 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
U2af1Q9D883 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
U2af1Q9D883 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC16■□□□□ 0.15
U2af1Q9D883 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Gm5847-201ENSMUST00000178959 1595 ntBASIC16■□□□□ 0.15
U2af1Q9D883 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC16■□□□□ 0.15
U2af1Q9D883 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Pde4d-201ENSMUST00000074103 2167 ntTSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
U2af1Q9D883 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
U2af1Q9D883 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
U2af1Q9D883 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
U2af1Q9D883 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
U2af1Q9D883 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC16■□□□□ 0.15
U2af1Q9D883 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Gm23200-201ENSMUST00000104379 132 ntBASIC16■□□□□ 0.15
U2af1Q9D883 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC16■□□□□ 0.15
U2af1Q9D883 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC16■□□□□ 0.15
U2af1Q9D883 Gm16570-201ENSMUST00000161951 436 ntBASIC16■□□□□ 0.15
U2af1Q9D883 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC16■□□□□ 0.15
U2af1Q9D883 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Mir6927-201ENSMUST00000184494 71 ntBASIC16■□□□□ 0.15
U2af1Q9D883 Gm28071-201ENSMUST00000190355 478 ntBASIC16■□□□□ 0.15
U2af1Q9D883 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC16■□□□□ 0.15
U2af1Q9D883 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC16■□□□□ 0.15
U2af1Q9D883 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Slc24a4-201ENSMUST00000079020 2337 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC16■□□□□ 0.15
U2af1Q9D883 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC16■□□□□ 0.15
U2af1Q9D883 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC16■□□□□ 0.15
U2af1Q9D883 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
U2af1Q9D883 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
U2af1Q9D883 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Gm5525-201ENSMUST00000190438 1312 ntBASIC15.99■□□□□ 0.15
U2af1Q9D883 Gm5053-201ENSMUST00000208361 1678 ntBASIC15.99■□□□□ 0.15
U2af1Q9D883 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
U2af1Q9D883 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Gm37472-201ENSMUST00000192342 4052 ntBASIC15.99■□□□□ 0.15
U2af1Q9D883 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Ift20-202ENSMUST00000108275 582 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC15.99■□□□□ 0.15
U2af1Q9D883 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC15.99■□□□□ 0.15
U2af1Q9D883 Gm16481-201ENSMUST00000119074 1227 ntBASIC15.99■□□□□ 0.15
U2af1Q9D883 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC15.99■□□□□ 0.15
U2af1Q9D883 Mir7070-201ENSMUST00000183657 86 ntBASIC15.99■□□□□ 0.15
U2af1Q9D883 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Gm17827-201ENSMUST00000211825 742 ntBASIC15.99■□□□□ 0.15
U2af1Q9D883 Gm18730-201ENSMUST00000218038 343 ntBASIC15.99■□□□□ 0.15
U2af1Q9D883 CT025694.1-201ENSMUST00000226188 934 ntBASIC15.99■□□□□ 0.15
U2af1Q9D883 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
U2af1Q9D883 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
U2af1Q9D883 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
U2af1Q9D883 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
U2af1Q9D883 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
U2af1Q9D883 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
U2af1Q9D883 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
U2af1Q9D883 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
U2af1Q9D883 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC15.98■□□□□ 0.15
U2af1Q9D883 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms