Protein–RNA interactions for Protein: Q9CXK8

Nip7, 60S ribosome subunit biogenesis protein NIP7 homolog, mousemouse

Known RBP Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nip7Q9CXK8 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nip7Q9CXK8 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Nip7Q9CXK8 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Nip7Q9CXK8 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nip7Q9CXK8 Camkk1-201ENSMUST00000092937 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nip7Q9CXK8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nip7Q9CXK8 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nip7Q9CXK8 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nip7Q9CXK8 Gm44942-201ENSMUST00000096093 2072 ntBASIC15.13■□□□□ 0.01
Nip7Q9CXK8 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nip7Q9CXK8 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nip7Q9CXK8 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Nip7Q9CXK8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nip7Q9CXK8 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nip7Q9CXK8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nip7Q9CXK8 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Nip7Q9CXK8 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Gm8737-201ENSMUST00000122208 642 ntBASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Gm23045-201ENSMUST00000175041 96 ntBASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Gm37707-201ENSMUST00000195309 325 ntTSL 3 BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Gm5714-201ENSMUST00000197343 566 ntBASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Gm44980-201ENSMUST00000205826 314 ntBASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Gm5537-201ENSMUST00000091117 1252 ntBASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC15.12■□□□□ 0.01
Nip7Q9CXK8 Gm2420-201ENSMUST00000119864 2149 ntBASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Gm22920-201ENSMUST00000102175 109 ntBASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Gm14193-201ENSMUST00000105067 153 ntBASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Gm4993-201ENSMUST00000118719 1174 ntBASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Gm15207-201ENSMUST00000119259 442 ntBASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Gm6485-201ENSMUST00000160676 439 ntBASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Gm17135-201ENSMUST00000167009 564 ntTSL 3 BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Gm37905-201ENSMUST00000195310 341 ntBASIC15.11■□□□□ 0.01
Nip7Q9CXK8 AC166344.1-201ENSMUST00000223745 674 ntBASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 AC160405.1-201ENSMUST00000218207 1545 ntBASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Nip7Q9CXK8 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Gm8038-201ENSMUST00000164674 2044 ntBASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Nip7Q9CXK8 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms