Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Gm25545-201ENSMUST00000122673 323 ntBASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Gm43852-201ENSMUST00000202098 917 ntBASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Gm44506-201ENSMUST00000206278 965 ntBASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cldnd1Q9CQX5 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 D930032P07Rik-201ENSMUST00000181393 1314 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Gm14942-201ENSMUST00000119642 336 ntBASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Gm13022-201ENSMUST00000121181 285 ntBASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Gm24844-201ENSMUST00000158679 127 ntBASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Gm4310-201ENSMUST00000177847 889 ntBASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Mir6923-201ENSMUST00000184592 72 ntBASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Gm23680-201ENSMUST00000083162 164 ntBASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Fam3a-201ENSMUST00000015427 1427 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cldnd1Q9CQX5 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Il21r-202ENSMUST00000206103 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Gm22711-201ENSMUST00000116890 133 ntBASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Gm4862-201ENSMUST00000170405 438 ntBASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Gm12407-201ENSMUST00000180219 324 ntBASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Gm18463-201ENSMUST00000207258 474 ntBASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 CT030653.1-201ENSMUST00000224382 1279 ntBASIC12.43□□□□□ -0.42
Cldnd1Q9CQX5 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms