Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Gm8365-201ENSMUST00000197334 648 ntBASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Gm43267-201ENSMUST00000199664 1796 ntBASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trim34aQ99PP6 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim34aQ99PP6 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Trim34aQ99PP6 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trim34aQ99PP6 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC15□□□□□ -0.01
Trim34aQ99PP6 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15□□□□□ -0.01
Trim34aQ99PP6 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 D830024N08Rik-201ENSMUST00000212132 2899 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Trim34aQ99PP6 Gm28727-201ENSMUST00000176549 443 ntTSL 3 BASIC15□□□□□ -0.01
Trim34aQ99PP6 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC15□□□□□ -0.01
Trim34aQ99PP6 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 Gm18893-201ENSMUST00000198416 943 ntBASIC15□□□□□ -0.01
Trim34aQ99PP6 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 AC140293.1-201ENSMUST00000225626 1247 ntBASIC15□□□□□ -0.01
Trim34aQ99PP6 AC171241.1-201ENSMUST00000228144 1166 ntBASIC15□□□□□ -0.01
Trim34aQ99PP6 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trim34aQ99PP6 Gm37513-201ENSMUST00000194830 2268 ntBASIC15□□□□□ -0.01
Trim34aQ99PP6 Gm38378-201ENSMUST00000195153 2268 ntBASIC15□□□□□ -0.01
Trim34aQ99PP6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 Sun2-203ENSMUST00000100439 3768 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trim34aQ99PP6 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trim34aQ99PP6 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC15□□□□□ -0.01
Trim34aQ99PP6 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Gm28323-201ENSMUST00000186817 2499 ntBASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Gm11956-201ENSMUST00000119525 512 ntBASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Gm15595-201ENSMUST00000120840 961 ntBASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Gm7666-201ENSMUST00000146631 819 ntBASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Gm8815-201ENSMUST00000173809 620 ntBASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Gm9630-201ENSMUST00000178304 885 ntBASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Gm4034-201ENSMUST00000187674 480 ntBASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Gm9463-201ENSMUST00000206707 601 ntBASIC14.99□□□□□ -0.01
Trim34aQ99PP6 CT485607.1-201ENSMUST00000216100 85 ntBASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Trim34aQ99PP6 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim34aQ99PP6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim34aQ99PP6 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms