Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Clip1Q922J3 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC18.98■□□□□ 0.63
Clip1Q922J3 Gm16071-201ENSMUST00000119589 793 ntBASIC18.98■□□□□ 0.63
Clip1Q922J3 Gm12899-201ENSMUST00000120565 551 ntBASIC18.98■□□□□ 0.63
Clip1Q922J3 Gm15610-201ENSMUST00000120584 195 ntBASIC18.98■□□□□ 0.63
Clip1Q922J3 Gm8737-201ENSMUST00000122208 642 ntBASIC18.98■□□□□ 0.63
Clip1Q922J3 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC18.98■□□□□ 0.63
Clip1Q922J3 Gm9034-201ENSMUST00000182071 1005 ntBASIC18.98■□□□□ 0.63
Clip1Q922J3 Gm17826-201ENSMUST00000189720 798 ntBASIC18.98■□□□□ 0.63
Clip1Q922J3 Ighv5-11-201ENSMUST00000193354 371 ntBASIC18.98■□□□□ 0.63
Clip1Q922J3 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC18.98■□□□□ 0.63
Clip1Q922J3 AC112945.1-201ENSMUST00000226413 514 ntBASIC18.98■□□□□ 0.63
Clip1Q922J3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Clip1Q922J3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Clip1Q922J3 Gm14340-201ENSMUST00000148700 1913 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Neu2-201ENSMUST00000070898 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Gm27196-201ENSMUST00000184787 2582 ntBASIC18.98■□□□□ 0.63
Clip1Q922J3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clip1Q922J3 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip1Q922J3 Gm34370-201ENSMUST00000209385 1410 ntTSL 5 BASIC18.97■□□□□ 0.63
Clip1Q922J3 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC18.97■□□□□ 0.63
Clip1Q922J3 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip1Q922J3 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip1Q922J3 Gm11892-201ENSMUST00000117711 1202 ntBASIC18.97■□□□□ 0.63
Clip1Q922J3 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip1Q922J3 Gm37299-201ENSMUST00000193951 826 ntBASIC18.97■□□□□ 0.63
Clip1Q922J3 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Clip1Q922J3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC18.97■□□□□ 0.63
Clip1Q922J3 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip1Q922J3 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip1Q922J3 Klhl8-202ENSMUST00000112811 2577 ntTSL 5 BASIC18.97■□□□□ 0.63
Clip1Q922J3 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Clip1Q922J3 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Clip1Q922J3 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip1Q922J3 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip1Q922J3 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Clip1Q922J3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Clip1Q922J3 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip1Q922J3 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip1Q922J3 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip1Q922J3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clip1Q922J3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip1Q922J3 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip1Q922J3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Clip1Q922J3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Clip1Q922J3 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Clip1Q922J3 Gm24844-201ENSMUST00000158679 127 ntBASIC18.96■□□□□ 0.63
Clip1Q922J3 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC18.96■□□□□ 0.63
Clip1Q922J3 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clip1Q922J3 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC18.96■□□□□ 0.63
Clip1Q922J3 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip1Q922J3 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clip1Q922J3 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC18.96■□□□□ 0.63
Clip1Q922J3 AC132901.1-201ENSMUST00000224345 508 ntBASIC18.96■□□□□ 0.63
Clip1Q922J3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Clip1Q922J3 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip1Q922J3 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip1Q922J3 Gm44758-201ENSMUST00000206096 2068 ntBASIC18.96■□□□□ 0.63
Clip1Q922J3 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clip1Q922J3 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip1Q922J3 F11-201ENSMUST00000034064 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip1Q922J3 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip1Q922J3 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Clip1Q922J3 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Clip1Q922J3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip1Q922J3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clip1Q922J3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.62
Clip1Q922J3 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip1Q922J3 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Clip1Q922J3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip1Q922J3 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Clip1Q922J3 Gm37458-201ENSMUST00000194055 410 ntBASIC18.95■□□□□ 0.62
Clip1Q922J3 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC18.95■□□□□ 0.62
Clip1Q922J3 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC18.95■□□□□ 0.62
Clip1Q922J3 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC18.95■□□□□ 0.62
Clip1Q922J3 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip1Q922J3 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip1Q922J3 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip1Q922J3 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip1Q922J3 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Clip1Q922J3 Gm37348-201ENSMUST00000193104 1789 ntBASIC18.95■□□□□ 0.62
Clip1Q922J3 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip1Q922J3 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip1Q922J3 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip1Q922J3 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip1Q922J3 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clip1Q922J3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Clip1Q922J3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Clip1Q922J3 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms