Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Prdm1-201ENSMUST00000039174 5281 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
Pcdhb2Q91Y00 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb2Q91Y00 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb2Q91Y00 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb2Q91Y00 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Pcdhb2Q91Y00 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb2Q91Y00 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb2Q91Y00 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Pcdhb2Q91Y00 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb2Q91Y00 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb2Q91Y00 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb2Q91Y00 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb2Q91Y00 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb2Q91Y00 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb2Q91Y00 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Pcdhb2Q91Y00 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Itpr3-201ENSMUST00000049308 8990 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Gm23912-201ENSMUST00000104687 87 ntBASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Gm13366-201ENSMUST00000122198 970 ntBASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Ly6g6c-201ENSMUST00000173207 598 ntAPPRIS ALT2 TSL 3 BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Ly6g6c-202ENSMUST00000173478 962 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Gm18056-201ENSMUST00000207670 568 ntBASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Gm18061-201ENSMUST00000208350 562 ntBASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Gm18063-201ENSMUST00000208529 568 ntBASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Gm18052-201ENSMUST00000208750 559 ntBASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Gm45574-201ENSMUST00000210921 331 ntBASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Stab1-201ENSMUST00000036618 7999 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Kcnip4-207ENSMUST00000176191 2116 ntTSL 5 BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Gm29100-201ENSMUST00000187564 4410 ntBASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Pcdhb2Q91Y00 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Crry-ps-201ENSMUST00000079090 1309 ntBASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Gm2383-201ENSMUST00000181461 807 ntBASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 Gm18212-201ENSMUST00000211678 889 ntBASIC12.97□□□□□ -0.33
Pcdhb2Q91Y00 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms