Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Mir7085-201ENSMUST00000184353 66 ntBASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Gm28455-201ENSMUST00000189105 1290 ntBASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Gm32999-201ENSMUST00000192693 562 ntBASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Gm18692-201ENSMUST00000193047 511 ntBASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Gm7287-201ENSMUST00000205267 602 ntBASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 AC132104.1-201ENSMUST00000213615 260 ntBASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 AC113082.2-201ENSMUST00000215876 756 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 AC153529.1-201ENSMUST00000217818 370 ntBASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 AC153962.4-201ENSMUST00000217878 242 ntBASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 AC132384.6-201ENSMUST00000218976 1206 ntBASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Gm28979-201ENSMUST00000190949 1540 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Pcdhb3Q91XZ7 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb3Q91XZ7 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Pcdhb3Q91XZ7 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.4□□□□□ -0.43
Pcdhb3Q91XZ7 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 AC159195.3-201ENSMUST00000225162 2211 ntBASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Gm12928-201ENSMUST00000117115 573 ntBASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Gm16044-201ENSMUST00000118475 450 ntBASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Gm23673-201ENSMUST00000157474 298 ntBASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Gm25927-201ENSMUST00000175058 117 ntBASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Gm27486-201ENSMUST00000184923 80 ntBASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Gm28438-201ENSMUST00000188299 345 ntBASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Gm44397-201ENSMUST00000195950 113 ntBASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Pcdhb3Q91XZ7 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb3Q91XZ7 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb3Q91XZ7 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC12.38□□□□□ -0.43
Pcdhb3Q91XZ7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.38□□□□□ -0.43
Pcdhb3Q91XZ7 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb3Q91XZ7 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb3Q91XZ7 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Pcdhb3Q91XZ7 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb3Q91XZ7 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Pcdhb3Q91XZ7 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb3Q91XZ7 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb3Q91XZ7 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb3Q91XZ7 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Pcdhb3Q91XZ7 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC12.38□□□□□ -0.43
Pcdhb3Q91XZ7 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms