Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm1Q8VC85 Gm10686-201ENSMUST00000215389 3247 ntBASIC11.71□□□□□ -0.54
Lsm1Q8VC85 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm1Q8VC85 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm1Q8VC85 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm1Q8VC85 Myoc-201ENSMUST00000028020 2074 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm1Q8VC85 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm1Q8VC85 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
Lsm1Q8VC85 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 AC160410.1-201ENSMUST00000219298 1972 ntBASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 AC129336.1-201ENSMUST00000220224 2277 ntBASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Gm24934-201ENSMUST00000103764 111 ntBASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Gm13875-201ENSMUST00000120162 282 ntBASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Gm11658-201ENSMUST00000120913 1008 ntBASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Gm2467-201ENSMUST00000182266 1010 ntBASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Gm6981-201ENSMUST00000182467 1008 ntBASIC11.7□□□□□ -0.54
Lsm1Q8VC85 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Abhd14b-207ENSMUST00000213179 1627 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Dusp19-201ENSMUST00000028384 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Gm43447-201ENSMUST00000198471 1535 ntBASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Gm13142-201ENSMUST00000117213 1453 ntBASIC11.7□□□□□ -0.54
Lsm1Q8VC85 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Lsm1Q8VC85 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Gm45428-201ENSMUST00000209619 1789 ntBASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 AC154639.1-201ENSMUST00000224393 2849 ntBASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Pamr1-201ENSMUST00000028612 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Gm13226-201ENSMUST00000117838 404 ntBASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Gm45784-201ENSMUST00000188360 142 ntBASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Gm37748-201ENSMUST00000194379 1140 ntBASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 AC166095.1-201ENSMUST00000223731 1241 ntBASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Dctn4-202ENSMUST00000223590 1530 ntBASIC11.69□□□□□ -0.54
Lsm1Q8VC85 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms