Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Gm15595-201ENSMUST00000120840 961 ntBASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Gm9630-201ENSMUST00000178304 885 ntBASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Gm4034-201ENSMUST00000187674 480 ntBASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Gm8365-201ENSMUST00000197334 648 ntBASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Gm17831-201ENSMUST00000205579 900 ntBASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Rps12-208ENSMUST00000220070 494 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Gm18974-201ENSMUST00000221478 1031 ntBASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Gm43267-201ENSMUST00000199664 1796 ntBASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Chmp7Q8R1T1 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Gm45266-201ENSMUST00000210111 2173 ntBASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Gm37131-201ENSMUST00000192502 1561 ntBASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Pcbd2-202ENSMUST00000124968 546 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Gm14091-201ENSMUST00000133534 874 ntTSL 2 BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Gm4726-201ENSMUST00000135604 736 ntBASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Gm6019-201ENSMUST00000148369 736 ntBASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Gm18893-201ENSMUST00000198416 943 ntBASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 AC171241.1-201ENSMUST00000228144 1166 ntBASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Chmp7Q8R1T1 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Chmp7Q8R1T1 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms