Protein–RNA interactions for Protein: Q8R1M2

H2afj, Histone H2A.J, mousemouse

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afjQ8R1M2 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Gm15703-201ENSMUST00000120250 880 ntBASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC11.33□□□□□ -0.6
H2afjQ8R1M2 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Gm2639-201ENSMUST00000156881 1297 ntBASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Gm40466-201ENSMUST00000212174 422 ntBASIC11.33□□□□□ -0.6
H2afjQ8R1M2 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Gm32025-201ENSMUST00000217960 307 ntBASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Gm10339-203ENSMUST00000225409 1671 ntBASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Pcdhb17-201ENSMUST00000053856 4660 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Gm8131-201ENSMUST00000213783 1570 ntBASIC11.33□□□□□ -0.6
H2afjQ8R1M2 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC11.33□□□□□ -0.6
H2afjQ8R1M2 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Olfr1419-203ENSMUST00000217617 3087 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Gm12502-201ENSMUST00000120197 444 ntBASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Gm16177-201ENSMUST00000120728 718 ntBASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Gm7029-201ENSMUST00000173226 450 ntBASIC11.32□□□□□ -0.6
H2afjQ8R1M2 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.32□□□□□ -0.6
H2afjQ8R1M2 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Gm2238-201ENSMUST00000192074 3669 ntBASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Hbs1l-201ENSMUST00000020153 2793 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
H2afjQ8R1M2 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afjQ8R1M2 Armcx3-202ENSMUST00000086880 2024 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
H2afjQ8R1M2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afjQ8R1M2 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afjQ8R1M2 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
H2afjQ8R1M2 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.31□□□□□ -0.6
H2afjQ8R1M2 Olfr222-203ENSMUST00000215339 2166 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
H2afjQ8R1M2 Zdhhc20-205ENSMUST00000226057 2179 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
H2afjQ8R1M2 Fosb-202ENSMUST00000207334 3664 ntTSL 5 BASIC11.31□□□□□ -0.6
H2afjQ8R1M2 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afjQ8R1M2 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afjQ8R1M2 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
H2afjQ8R1M2 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afjQ8R1M2 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
H2afjQ8R1M2 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afjQ8R1M2 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
H2afjQ8R1M2 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC11.31□□□□□ -0.6
H2afjQ8R1M2 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 98.6 ms