Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Zswim3Q8CFL8 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC13.35□□□□□ -0.27
Zswim3Q8CFL8 CT009536.2-201ENSMUST00000225370 665 ntBASIC13.35□□□□□ -0.27
Zswim3Q8CFL8 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Zswim3Q8CFL8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Zswim3Q8CFL8 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Zswim3Q8CFL8 Gm8894-201ENSMUST00000074642 666 ntBASIC13.35□□□□□ -0.27
Zswim3Q8CFL8 Gm13910-201ENSMUST00000121752 1428 ntBASIC13.35□□□□□ -0.27
Zswim3Q8CFL8 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.35□□□□□ -0.27
Zswim3Q8CFL8 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Zswim3Q8CFL8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Zswim3Q8CFL8 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Zswim3Q8CFL8 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Zswim3Q8CFL8 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Zswim3Q8CFL8 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Zswim3Q8CFL8 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.35□□□□□ -0.27
Zswim3Q8CFL8 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Zswim3Q8CFL8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Sparc-207ENSMUST00000213866 1366 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Mir671-201ENSMUST00000102432 98 ntBASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Gm12783-201ENSMUST00000121425 397 ntBASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Gm24398-201ENSMUST00000157870 109 ntBASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Gm5714-201ENSMUST00000197343 566 ntBASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Gm7959-201ENSMUST00000221823 1078 ntBASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 AC121960.1-201ENSMUST00000227982 564 ntBASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 AC136376.2-201ENSMUST00000228819 490 ntBASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Zswim3Q8CFL8 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Zswim3Q8CFL8 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Zswim3Q8CFL8 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Zswim3Q8CFL8 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Zswim3Q8CFL8 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Gm43267-201ENSMUST00000199664 1796 ntBASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Gm12218-201ENSMUST00000117666 399 ntBASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Gm5638-201ENSMUST00000118618 1258 ntBASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 CT025602.2-201ENSMUST00000226553 772 ntBASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 AC102368.1-201ENSMUST00000227161 892 ntBASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Gm23680-201ENSMUST00000083162 164 ntBASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC13.33□□□□□ -0.28
Zswim3Q8CFL8 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms