Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccdc28bQ8CEG5 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Ptprm-203ENSMUST00000224091 3773 ntBASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Gm38671-201ENSMUST00000200573 130 ntBASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Gm24526-201ENSMUST00000082921 158 ntBASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Gm10339-203ENSMUST00000225409 1671 ntBASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccdc28bQ8CEG5 Kyat1-206ENSMUST00000113663 2026 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Cdh7-202ENSMUST00000112701 4945 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Gm8420-201ENSMUST00000097103 598 ntBASIC12.04□□□□□ -0.48
Ccdc28bQ8CEG5 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms