Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Gm9361-201ENSMUST00000198695 1507 ntBASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 AC160405.1-201ENSMUST00000218207 1545 ntBASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Gm15711-201ENSMUST00000118889 535 ntBASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Gm12380-201ENSMUST00000119012 544 ntBASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Mir5120-201ENSMUST00000175020 78 ntBASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Gm27552-201ENSMUST00000183351 62 ntBASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Gm27844-201ENSMUST00000183613 62 ntBASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Gm43962-201ENSMUST00000203898 190 ntBASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 AC098716.1-201ENSMUST00000213527 703 ntBASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Gm21027-201ENSMUST00000219300 1236 ntBASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Chst4-201ENSMUST00000109222 1942 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Prpf31Q8CCF0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Gm18782-201ENSMUST00000209023 1399 ntBASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Lnx1-206ENSMUST00000121690 2302 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Gm23912-201ENSMUST00000104687 87 ntBASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Gm7722-201ENSMUST00000120646 741 ntBASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Gm13944-201ENSMUST00000126572 721 ntTSL 2 BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Gm28071-201ENSMUST00000190355 478 ntBASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Gm18711-201ENSMUST00000199341 750 ntBASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Gm45021-201ENSMUST00000204521 369 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Gm5455-201ENSMUST00000058710 715 ntBASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Rnf17-202ENSMUST00000223627 2077 ntBASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Exosc1-202ENSMUST00000112123 1499 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC13.34□□□□□ -0.27
Prpf31Q8CCF0 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Prpf31Q8CCF0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Prpf31Q8CCF0 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Prpf31Q8CCF0 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms