Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Gm25214-201ENSMUST00000104573 129 ntBASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Gm7857-201ENSMUST00000117957 358 ntBASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Gm12566-201ENSMUST00000121479 359 ntBASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Gm27046-201ENSMUST00000182160 463 ntBASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Gm42997-202ENSMUST00000200321 985 ntBASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps53Q8CCB4 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Gm38376-201ENSMUST00000195493 2253 ntBASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Gm10728-201ENSMUST00000194292 1829 ntBASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Jak1-201ENSMUST00000102781 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Mcm8-202ENSMUST00000066559 3397 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 Them4-201ENSMUST00000049822 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps53Q8CCB4 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.21□□□□□ -0.14
Vps53Q8CCB4 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Vps53Q8CCB4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps53Q8CCB4 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps53Q8CCB4 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Vps53Q8CCB4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.21□□□□□ -0.14
Vps53Q8CCB4 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Prpf40a-206ENSMUST00000209364 2833 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Zmat1-202ENSMUST00000113185 3378 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Gm24231-201ENSMUST00000104315 133 ntBASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Gm14263-201ENSMUST00000117955 746 ntBASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Gm12217-201ENSMUST00000118858 696 ntBASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC14.2□□□□□ -0.14
Vps53Q8CCB4 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Mir6927-201ENSMUST00000184494 71 ntBASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Gm3096-201ENSMUST00000185770 364 ntBASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps53Q8CCB4 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps53Q8CCB4 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vps53Q8CCB4 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vps53Q8CCB4 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms