Protein–RNA interactions for Protein: Q8BHD0

Rab39a, Ras-related protein Rab-39A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab39aQ8BHD0 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Cdk7-205ENSMUST00000225990 1159 ntBASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 AC122459.1-201ENSMUST00000228373 885 ntBASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Gm43172-201ENSMUST00000202139 2137 ntBASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rab39aQ8BHD0 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Uimc1-201ENSMUST00000026997 2931 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Ndc1-204ENSMUST00000139560 4584 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Ngfr-201ENSMUST00000000122 3446 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Gm4271-201ENSMUST00000174444 973 ntBASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Gm29127-201ENSMUST00000188304 517 ntBASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Rab39aQ8BHD0 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Gm16479-201ENSMUST00000121706 932 ntBASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Gm26185-201ENSMUST00000157692 266 ntBASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Gm43818-201ENSMUST00000200605 466 ntBASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Gm40466-201ENSMUST00000212174 422 ntBASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab39aQ8BHD0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 50.5 ms