Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc116Q80X53 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ccdc116Q80X53 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ccdc116Q80X53 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc116Q80X53 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc116Q80X53 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc116Q80X53 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc116Q80X53 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Ccdc116Q80X53 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc116Q80X53 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc116Q80X53 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Ccdc116Q80X53 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Ccdc116Q80X53 AC167669.2-201ENSMUST00000224417 1620 ntBASIC11.97□□□□□ -0.49
Ccdc116Q80X53 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Poll-201ENSMUST00000026239 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Gm11531-201ENSMUST00000117614 555 ntBASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Gm14832-201ENSMUST00000121289 322 ntBASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Gm13786-201ENSMUST00000122371 333 ntBASIC11.96□□□□□ -0.49
Ccdc116Q80X53 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Gm5597-201ENSMUST00000182353 1193 ntBASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Gm45880-201ENSMUST00000213041 853 ntBASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Gm25857-201ENSMUST00000082788 129 ntBASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ccdc116Q80X53 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc116Q80X53 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc116Q80X53 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc116Q80X53 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc116Q80X53 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc116Q80X53 4833439L19Rik-208ENSMUST00000153065 2502 ntTSL 5 BASIC11.96□□□□□ -0.5
Ccdc116Q80X53 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc116Q80X53 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC11.96□□□□□ -0.5
Ccdc116Q80X53 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc116Q80X53 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc116Q80X53 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ccdc116Q80X53 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Gm8062-201ENSMUST00000139696 444 ntBASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Mospd4-201ENSMUST00000180618 576 ntBASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Gm28882-201ENSMUST00000185504 314 ntBASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ccdc116Q80X53 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 66.5 ms