Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Gm14058-201ENSMUST00000116082 735 ntBASIC11.67□□□□□ -0.54
Vrk1Q80X41 Gm13035-201ENSMUST00000117496 342 ntBASIC11.67□□□□□ -0.54
Vrk1Q80X41 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.67□□□□□ -0.54
Vrk1Q80X41 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Gm19353-201ENSMUST00000184561 445 ntBASIC11.67□□□□□ -0.54
Vrk1Q80X41 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Gm270-201ENSMUST00000223010 976 ntBASIC11.67□□□□□ -0.54
Vrk1Q80X41 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Gm21811-201ENSMUST00000096485 930 ntBASIC11.67□□□□□ -0.54
Vrk1Q80X41 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Vrk1Q80X41 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.66□□□□□ -0.54
Vrk1Q80X41 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.66□□□□□ -0.54
Vrk1Q80X41 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.66□□□□□ -0.54
Vrk1Q80X41 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Gm12165-201ENSMUST00000117047 342 ntBASIC11.66□□□□□ -0.54
Vrk1Q80X41 Gm13045-201ENSMUST00000119019 712 ntBASIC11.66□□□□□ -0.54
Vrk1Q80X41 Gm12501-201ENSMUST00000119163 529 ntBASIC11.66□□□□□ -0.54
Vrk1Q80X41 Gm15432-201ENSMUST00000121106 195 ntBASIC11.66□□□□□ -0.54
Vrk1Q80X41 Smim5-203ENSMUST00000152171 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Gm45770-201ENSMUST00000212105 616 ntBASIC11.66□□□□□ -0.54
Vrk1Q80X41 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.66□□□□□ -0.54
Vrk1Q80X41 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Vrk1Q80X41 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Vrk1Q80X41 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms