Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 n-R5s211-201ENSMUST00000093689 119 ntBASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 AC129931.1-201ENSMUST00000228865 1861 ntBASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ddx55Q6ZPL9 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.83□□□□□ -0.19
Ddx55Q6ZPL9 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ddx55Q6ZPL9 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ddx55Q6ZPL9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.19
Ddx55Q6ZPL9 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Gm44260-201ENSMUST00000204946 2094 ntBASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Gm14942-201ENSMUST00000119642 336 ntBASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Gm5706-201ENSMUST00000181525 993 ntBASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Gm29418-201ENSMUST00000186162 647 ntTSL 5 BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Gm9661-201ENSMUST00000221611 1122 ntBASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ddx55Q6ZPL9 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Acrbp-202ENSMUST00000088294 1883 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Gm3150-201ENSMUST00000166418 204 ntBASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Gm8531-201ENSMUST00000188319 893 ntBASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Gm2553-201ENSMUST00000215986 605 ntBASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 AC124433.1-201ENSMUST00000224483 1063 ntBASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ddx55Q6ZPL9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Lynx1-201ENSMUST00000023259 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Ddx55Q6ZPL9 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms